G59862


Basic Information

Item Value
gene id G59862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4039515 ~ 4039918 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74878
aaaataactgtcagtctccctcggtctggggctccatgcaagatctcacctcgtggagtttcaatgatcatgagaacggtgaggaatcagcccagaactacacgggaggatcttgttaatgatctcaaggcagctgggaccatagtcaccaagaaaacaattggtaacacactacgccgtgaaggactgaaatcctgcagcgcccgcaaggcccgtctgaagtttgccaacatctgaatgattcagaggagaactgggtgaaagtgttgtggtcagatgagaccaaaatcgagctctttggcatcaactcaactcgctgTGTttggagcaggaggaaagaacaccatccccacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74878 True 354 lncRNA 0.50 3 4039515 4039918

Neighbor

gene id symbol gene type direction distance location
AMCG00019949 LOC107599025,LOC107725315 coding downstream 310989 3722895 ~ 3728526 (-)
AMCG00019950 NA coding downstream 333418 3675107 ~ 3706097 (-)
AMCG00019946 NA coding downstream 509879 3523288 ~ 3529636 (-)
AMCG00019947 NA coding downstream 541769 3496276 ~ 3497746 (-)
AMCG00019944 NA coding downstream 659918 3340802 ~ 3379597 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding upstream 67079 4106997 ~ 4133823 (-)
AMCG00019953 NA coding upstream 103072 4142990 ~ 4164282 (-)
AMCG00019954 NA coding upstream 124881 4164799 ~ 4172609 (-)
AMCG00019955 si:dkeyp-51b7.3,fibcd1,LOC106585783,LOC107665003,LOC107598982,LOC107725318 coding upstream 145387 4185305 ~ 4195180 (-)
AMCG00019956 fibcd1,LOC105015243,LOC108428067,LOC107574583,LOC107596897 coding upstream 215354 4255272 ~ 4263577 (-)
G59853 NA non-coding downstream 242809 3780898 ~ 3796706 (-)
G59852 NA non-coding downstream 364501 3671023 ~ 3675014 (-)
G59826 NA non-coding downstream 392181 3646039 ~ 3647334 (-)
G59827 NA non-coding downstream 397401 3640038 ~ 3642114 (-)
G59825 ttll11,LOC107579646 non-coding downstream 441755 3597205 ~ 3597760 (-)
G59880 NA non-coding upstream 55432 4095350 ~ 4095984 (-)
G59907 NA non-coding upstream 268758 4308676 ~ 4308945 (-)
G59922 NA non-coding upstream 582059 4621977 ~ 4622357 (-)
G59932 NA non-coding upstream 608104 4648022 ~ 4651002 (-)
G59938 NA non-coding upstream 628432 4668350 ~ 4668869 (-)
G59806 NA other downstream 559406 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 853550 3166237 ~ 3185965 (-)
G59720 NA other downstream 928168 3107801 ~ 3111347 (-)
G59712 NA other downstream 1005180 3031856 ~ 3034335 (-)
G59545 NA other downstream 1532495 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 972526 5012444 ~ 5061512 (-)
G60118 NA other upstream 1223996 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 1236744 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 1251672 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 2119659 6159577 ~ 6172474 (-)

Expression


Co-expression Network