G59907


Basic Information

Item Value
gene id G59907
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4308676 ~ 4308945 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74938
cAGAAACGCTCctactccccccctccctcgtGTTAAGAAGATCAaatgtggggagggggggagttgAAAGGCactcctcctccaaacatgtTTGGTCCGGGGGTCCTGGGGCCCCCACTTGAGGGCCGCTCCTCAGGAGCAGAGCCCAACCTGACACGCTGGTCTCGGTAGTACAGACGTGAGTGAAGCTTCCTATGTGCACCCGGATTggctctttgtctctctctctctctctctgcaggtctgtGAGGACGCCGAGGCGCCGGCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74938 True 270 lncRNA 0.61 1 4308676 4308945

Neighbor

gene id symbol gene type direction distance location
AMCG00019956 fibcd1,LOC105015243,LOC108428067,LOC107574583,LOC107596897 coding downstream 45099 4255272 ~ 4263577 (-)
AMCG00019955 si:dkeyp-51b7.3,fibcd1,LOC106585783,LOC107665003,LOC107598982,LOC107725318 coding downstream 113496 4185305 ~ 4195180 (-)
AMCG00019954 NA coding downstream 136067 4164799 ~ 4172609 (-)
AMCG00019953 NA coding downstream 144394 4142990 ~ 4164282 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding downstream 174853 4106997 ~ 4133823 (-)
AMCG00019960 NA coding upstream 313472 4622417 ~ 4627869 (-)
AMCG00019964 fam78a,LOC106563259 coding upstream 446579 4755524 ~ 4766859 (-)
AMCG00019968 uck1,LOC102793675 coding upstream 566641 4875586 ~ 4886898 (-)
AMCG00019970 NA coding upstream 589995 4898940 ~ 4908555 (-)
AMCG00019972 sh3glb2 coding upstream 621558 4930503 ~ 4940565 (-)
G59880 NA non-coding downstream 212692 4095350 ~ 4095984 (-)
G59862 NA non-coding downstream 268758 4039515 ~ 4039918 (-)
G59853 NA non-coding downstream 511970 3780898 ~ 3796706 (-)
G59852 NA non-coding downstream 633662 3671023 ~ 3675014 (-)
G59826 NA non-coding downstream 661342 3646039 ~ 3647334 (-)
G59922 NA non-coding upstream 313032 4621977 ~ 4622357 (-)
G59932 NA non-coding upstream 339077 4648022 ~ 4651002 (-)
G59938 NA non-coding upstream 359405 4668350 ~ 4668869 (-)
G59939 NA non-coding upstream 360013 4668958 ~ 4669158 (-)
G59940 NA non-coding upstream 362835 4671780 ~ 4672168 (-)
G59806 NA other downstream 828567 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 1122711 3166237 ~ 3185965 (-)
G59720 NA other downstream 1197329 3107801 ~ 3111347 (-)
G59712 NA other downstream 1274341 3031856 ~ 3034335 (-)
G59545 NA other downstream 1801656 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 703499 5012444 ~ 5061512 (-)
G60118 NA other upstream 954969 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 967717 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 982645 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 1850632 6159577 ~ 6172474 (-)

Expression


Co-expression Network