G59940


Basic Information

Item Value
gene id G59940
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 4671780 ~ 4672168 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74983
TTGTTCTGTGGCATGAGTGGAGGGCTGGCTGGGGACGCTCCACTGGGACGTTTTGTTGTACAGGCGGAGGTCCTGCAGGCTGGTCACAAGCACGGCCAGCTTCTGCTTCTGCTGATTGATGATGTCAAGGTGATTGGCCAGAGCACTGAACAGCGCTTCCCTCTCCGGGACGATCAGGTGCcttggaagagaagaaaaaaataacaaatgaaaacagagatggagacagaaAATCAGGAAAGCAGACTTCTGAGACCATTAGCAGCACTTTCAGCACAGTCTCTtacttctttttcttcttcttctccagaTGTTTCTCCCACTCCAGATCAAGCACATCATTTACATCTTCCACTGCAAACTTGATGTACTGGTACAACCTACGGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74983 True 389 lncRNA 0.48 1 4671780 4672168

Neighbor

gene id symbol gene type direction distance location
AMCG00019960 NA coding downstream 43911 4622417 ~ 4627869 (-)
AMCG00019956 fibcd1,LOC105015243,LOC108428067,LOC107574583,LOC107596897 coding downstream 408203 4255272 ~ 4263577 (-)
AMCG00019955 si:dkeyp-51b7.3,fibcd1,LOC106585783,LOC107665003,LOC107598982,LOC107725318 coding downstream 476600 4185305 ~ 4195180 (-)
AMCG00019954 NA coding downstream 499171 4164799 ~ 4172609 (-)
AMCG00019953 NA coding downstream 507498 4142990 ~ 4164282 (-)
AMCG00019964 fam78a,LOC106563259 coding upstream 83356 4755524 ~ 4766859 (-)
AMCG00019968 uck1,LOC102793675 coding upstream 203418 4875586 ~ 4886898 (-)
AMCG00019970 NA coding upstream 226772 4898940 ~ 4908555 (-)
AMCG00019972 sh3glb2 coding upstream 258335 4930503 ~ 4940565 (-)
AMCG00019971 NA coding upstream 297022 4969190 ~ 4983211 (-)
G59939 NA non-coding downstream 2622 4668958 ~ 4669158 (-)
G59938 NA non-coding downstream 2911 4668350 ~ 4668869 (-)
G59932 NA non-coding downstream 20778 4648022 ~ 4651002 (-)
G59922 NA non-coding downstream 49423 4621977 ~ 4622357 (-)
G59907 NA non-coding downstream 362835 4308676 ~ 4308945 (-)
G59941 NA non-coding upstream 1116 4673284 ~ 4673609 (-)
G59958 NA non-coding upstream 78319 4750487 ~ 4755192 (-)
G59963 NA non-coding upstream 124558 4796726 ~ 4800269 (-)
G59979 prrc2b,LOC107562325 non-coding upstream 172629 4844797 ~ 4848796 (-)
G60034 dpm2,LOC107664400,LOC107681851,LOC107712384 non-coding upstream 313513 4985681 ~ 4989055 (-)
G59806 NA other downstream 1191671 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 1485815 3166237 ~ 3185965 (-)
G59720 NA other downstream 1560433 3107801 ~ 3111347 (-)
G59712 NA other downstream 1637445 3031856 ~ 3034335 (-)
G59545 NA other downstream 2164760 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 340276 5012444 ~ 5061512 (-)
G60118 NA other upstream 591746 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 604494 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 619422 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 1487409 6159577 ~ 6172474 (-)

Expression


Co-expression Network