G60099


Basic Information

Item Value
gene id G60099
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 5162006 ~ 5162521 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU75185
GATTCATTGTGTTGTTTCTATAATGCTGGCTCAACAAAGACCACAATATATTTGGCTTTTTCATAATACCACATTTTTAGATTGATATTGCTGATTGATATAAACCAGTCCCATATTAATATCCAGTTCTCCACGTCACTTTTAGGAGTCTGTATACTATTTTGGCAGCTATAATTGTATTACTCCAAAGTACAAATTGTGacactttatttcaaaatgttatttcatgGTCAACTTATGATTTCCCTTTCCTGTCTCACCGTCTGGGTTTCGTCCTCCCAGTTCACATGGTAGCCAATGAACGCGTAGCTCCTGGCCGTCTTCCTGATCTCCGCGACCATCACGTCCTCCACCCGCTGCAGGAACGCGGCCAGGCCCGGGGCATCGCTCCCAGACTCCGCACCACAGCCCTGCAACGGGCACGTCTGCGACTCGGTCTGGGTGCCCATCTCTGACTTTTGACTGGTCTGCACGCCTGCCTGCGTGGTCTTCAGTGGTTTTGTCTGACAGCTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75185 True 516 lncRNA 0.47 1 5162006 5162521

Neighbor

gene id symbol gene type direction distance location
AMCG00019982 NA coding downstream 2686 5158359 ~ 5159320 (-)
AMCG00019983 NA coding downstream 8953 5132046 ~ 5153053 (-)
AMCG00019974 naif1,LOC107754425,LOC107559603,LOC107560040 coding downstream 92967 5065640 ~ 5069039 (-)
AMCG00019975 NA coding downstream 156023 4992636 ~ 5005983 (-)
AMCG00019971 NA coding downstream 178795 4969190 ~ 4983211 (-)
AMCG00019985 sptan1 coding upstream 4845 5167366 ~ 5206880 (-)
AMCG00019984 LOC102792584 coding upstream 45252 5207773 ~ 5230138 (-)
AMCG00019987 NA coding upstream 71709 5234230 ~ 5234454 (-)
AMCG00019989 NA coding upstream 134932 5297453 ~ 5301869 (-)
AMCG00019990 NA coding upstream 213345 5375866 ~ 5380964 (-)
G60089 NA non-coding downstream 1309 5118351 ~ 5160697 (-)
G60088 set,LOC105014167,LOC100696975,LOC102777863,LOC107083999 non-coding downstream 4813 5153058 ~ 5157193 (-)
G60034 dpm2,LOC107664400,LOC107681851,LOC107712384 non-coding downstream 172951 4985681 ~ 4989055 (-)
G59979 prrc2b,LOC107562325 non-coding downstream 313210 4844797 ~ 4848796 (-)
G59963 NA non-coding downstream 361737 4796726 ~ 4800269 (-)
G60100 NA non-coding upstream 1243 5163764 ~ 5163995 (-)
G60101 NA non-coding upstream 2746 5165267 ~ 5165488 (-)
G60102 NA non-coding upstream 3838 5166359 ~ 5167290 (-)
G60179 NA non-coding upstream 308798 5471319 ~ 5523619 (-)
G60230 NA non-coding upstream 828424 5990945 ~ 5991184 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other downstream 100494 5012444 ~ 5061512 (-)
G59806 NA other downstream 1681897 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 1976041 3166237 ~ 3185965 (-)
G59720 NA other downstream 2050659 3107801 ~ 3111347 (-)
G59712 NA other downstream 2127671 3031856 ~ 3034335 (-)
G60118 NA other upstream 101393 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 114141 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 129069 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 997056 6159577 ~ 6172474 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other upstream 1288101 6450622 ~ 6461428 (-)

Expression


Co-expression Network