G60723


Basic Information

Item Value
gene id G60723
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 8793968 ~ 8796315 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU75964
TGAAATTCACTCTTTATTACACAGCTGCACTTTAGATTTACAGTTAAACATTCTCTCCTTCTTATACAGGGAAAAAGGGAGAAGcatcatatttgcaaaatatttatgaaaactgGCGATGCACAGCAAAGTcagtgaagttttttttatatatataaacaaaaataaataacattcttTTCACATTAGAAATTCAAGGGAACTTTGCCAAAGACGAGCCAACGAGAGACAACAAACTTCAACAGGGAGTGCGGGAggtgggtggtggtggtggtggccaGGCCCTCAGCTAACTGTGTACTAATGGAAGTATCATTTCTGGTCACAGGAGCTGTCTGTCTAAAAATGCAGTTCAGTcttaggattgttttttttgttttgttttttacagggCAGGGAAAAGCAAAAAACCTCAAAAACCTCAAAAAGCAATTACGCTTTGTAATGCACCACCACTGCTAAGATCTAcccttcttttcattttagtaagggagaatataaaaacaaatcaacaaaatggtcaaaataaagtataaacCAGCTACAACAAAGGCTACTATATTACCTGTCTGGGCTAGCAGGACAACTTCTGCCAAGGCCCTCCCTGCTCTAAATGGGCAAAGCAAGACATTCAGTATGGCAGAAAATGTACTGGTTGACAACCCTAACACAGtataatgttcatgttttttgttgtgcacattttttttataccatCTGTCTTTGGAAAACTACATACCTGCAACTTGATGAACCCATTGTatctagtgtgtgtgtagatgtatataacatgttttctgcttgaataaagtaaaataacagTGAAAGAAATAAGACTCCAACTGCACAGTGTGACACACTTCAGGATTTACAGGTTGCAAGCTCTTGTACAAAAGGTACTGATGAACAAATGTAATTCTAAGGGTTTCTAATGTCCAGCACCTGatgttaaattatacatattccTGTAGCACACAACACCTGAAATGGATCCAGCAGTTATGCAACAGAAGTTGTATTTACTTCCCTGTGATGTGTATAAACCGGAAGAAAgtgatacatacattttatagtaCTCAAATACCAGCAAACAGATATCACTGACTCATGTCAACCAGAAGGCCACAATGGGAAGACCAGAGCTGGAGAGGCAAGATGAGACACTAAACACGTGGACATTGACAGAAATGGAATGGACAGACACCAACCTAACACTTGTGATCGTACTGTTACAGAATATACAAGAAATGTGCATCTAAAGGGGATTTGTAATAGAGTCATGATAAACATAGTTCAACTGGTAGTTTGGATAGATTAATAAAGCTTCCTttcataatatttaatcatgTGCAAAGAATTTTAAGTAGCAATGACCACACTATTTATAACAACGACATATATATCTGAAAGTGTATCTGAAATCTCGGAGCAACTATAAAAGAAGTACGCCCGCTTTCCTTGCAGCGTTTATCACTAACAGgtatcaaaacaaacaactatatacatttcaaagcgAATACTACTGACAGACTTCGAGAGTAgctgttttccatttaaatcaCTCTAGGATTTCAGTCCCACTTTCTACTGCTCCTATACGGCGAACTTCTATGTATCAAAAACATCCTTCACGAAGCCGGTTTACTGAAGCAGTGTATGACAAGTCAATTTCACAGCAATGGCAGCTTGTTGACCACATGTAAAATAGTGCATGGGTTTACCAATATGAAGAATACTATCCGTAACGTCAACTTGTAAACTTAGCACTGGGTGGAGGCTTCAATATCACAAAGCCAGAAGGTAGTGGACAGTGAATTATAATATCCACAATTGAACTCAAAGATCATGTCATGGAAACGCTGTCTCTCCACCTTCACttgtgcaattaaaattaaCCCTTTCAAAAGTGTTTAATAGACTGTAAATCTGCTTTGAAACATGACCTGTTGTGATTTCACCAGATTTGAACTTTTAGGTCCCTTTATACATCTGTTaagctgtttttaatattcatcaGCTGTTGTGTTTATGTTCAGAATATTTTTAGATTGATGGAAATTTCCATAACTGAAAGCACCATGCTTCTCTGAACAACAGATGTGTTTGTGCTTTCTATTCAAACAAGGGGTCTTAATTAACATCCGGGTGCAATCTTGGTTCTCTGAAGAGAGATTTTCTTAAGCCTGACATTTATAAAAAGCCTGCCATTTGACTTGCTCTTCCAGTGATCACAGTATGCAGTAACTGAAAGACTCTCACTCTTTGCTGGAAGTTGCTCCAGGCAGTGTCTTCTACTAAACTACTTAACAGGGTTGGGGCCAATTCCACTTTTTCGATTCCAATTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75964 True 2348 lncRNA 0.38 1 8793968 8796315

Neighbor

gene id symbol gene type direction distance location
AMCG00020061 NA coding downstream 467593 8313813 ~ 8326375 (-)
AMCG00020062 NA coding downstream 488016 8302263 ~ 8305952 (-)
AMCG00020058 NA coding downstream 659017 8134181 ~ 8134951 (-)
AMCG00020057 rxra coding downstream 677932 8090305 ~ 8116036 (-)
AMCG00020055 NA coding downstream 722038 8053819 ~ 8071930 (-)
AMCG00020067 NA coding upstream 58501 8854816 ~ 8876263 (-)
AMCG00020081 NA coding upstream 168246 8964561 ~ 8966030 (-)
AMCG00020078 fnbp1 coding upstream 225508 9021823 ~ 9049768 (-)
AMCG00020077 NA coding upstream 281425 9077740 ~ 9083125 (-)
AMCG00020082 NA coding upstream 319158 9115473 ~ 9127068 (-)
G60656 NA non-coding downstream 746727 8044609 ~ 8047241 (-)
G60610 NA non-coding downstream 939595 7853001 ~ 7854373 (-)
G60540 NA non-coding downstream 1221137 7572597 ~ 7572831 (-)
G60387 NA non-coding downstream 1993218 6797909 ~ 6800750 (-)
G60377 NA non-coding downstream 2098192 6679178 ~ 6695776 (-)
G60725 NA non-coding upstream 2649 8798964 ~ 8799167 (-)
G60730 NA non-coding upstream 10705 8807020 ~ 8809893 (-)
G60774 NA non-coding upstream 183958 8980273 ~ 9017406 (-)
G60833 NA non-coding upstream 361612 9157927 ~ 9160733 (-)
G60839 NA non-coding upstream 473245 9269560 ~ 9303247 (-)
G60516 NA other downstream 1231376 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 2322534 6467271 ~ 6471434 (-)
G60348 NA other downstream 2327382 6463548 ~ 6466586 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other downstream 2332540 6450622 ~ 6461428 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 2621494 6159577 ~ 6172474 (-)
AMCG00020066 fam69b,fa69b other upstream 16470 8812785 ~ 8828109 (-)
G60746 NA other upstream 42896 8839211 ~ 8839945 (-)
G61170 NA other upstream 1959153 10755468 ~ 10756419 (-)
G61269 NA other upstream 2899376 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 3205385 12001700 ~ 12052211 (-)

Expression


Co-expression Network