G61098


Basic Information

Item Value
gene id G61098
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10506408 ~ 10507637 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76445
TGCTGGAGGTTCACaatcatctttttctttctgcctttttttattttgtattttttatgtatgactgtttttattctgttttgcaGTTGCATGATTTTAGTCATCTTGCAGCACGGGGGAACATataatatgacatttaaaacGTTTTATAAGAAAGTAAGTTGAAgttaatgcaatgtttttacacttggtaaaaaaaaaaaagatcatcACCGATTAGGACATGTTTcgcagatgttttatttattttatttttttaagaagctgCACCAGCTCCAGCATCAATACTTCATGAAGTGTAATTACTGGGCGTTAcgtaatgaaatatttatatagttatacCTTTTTTGCAtcataaactatatatatatatatatatatatatatatatatatatatatatatatatatattctaattgAGCGTTTAATTTCAAGGGTAATTCGTTATTATTGATTGCCACTATTGGTATGCtccacaactttttttttttttagtttttagtttttttgtggtgATAGATTAAAAATCATAGAGAAGAGGGGTGGctgtattcaatattttaactaGTAATCATTATTTTTCGTGTTAAAATCACAGCAGATATTGCAGACTCGAGCAATACTAATTTATTAGGTCACACATCATAATTGATAATAATAGatatatacaaagaaaatacagttaTATTCAAGAGAAAGAgaatcaaaagaaaacatgtgGCACACAAAAAGATAATTCAACAGTGTGTCACtgctggaaataaaatactaaGTTGGGTTTTGCTAATCCTTTTGAAAACAATCAACTCTAGCCTATTGCCTATAATAAAGGACACATCTAAATGGTCGGTCACAGCAGGTGCTTATTGGGGTGGATTTCCTCAGAGGTATTCGCCTGATCATCAATGGGCTAATTATAAACGTTTCTCTTCTGTTAAGATCTACTATATTTGAGTATAGAGTACAGAAGTAACATTTTCAGGACATAATAGTAATATGATTAAGTAGCTCCTgagtttaattgcattttttcagtgttctgtttttttacattttaagggGAAGACATTTCGTGgatgtttaattatgttttgttttaaataacttcCAAAACTTGCACAGTAACTTATTTGAGTAAGTATATAACAATGTTAACtaagtacatttatttgaatatgtattatatatttatagctctatctatctatctatctatctatctatctat

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76445 True 1230 lncRNA 0.29 1 10506408 10507637

Neighbor

gene id symbol gene type direction distance location
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 244584 10227494 ~ 10261824 (-)
AMCG00020112 NA coding downstream 563332 9931750 ~ 9943076 (-)
AMCG00020107 NA coding downstream 615845 9873449 ~ 9890563 (-)
AMCG00020106 NA coding downstream 653862 9826766 ~ 9852546 (-)
AMCG00020100 NA coding downstream 707250 9792806 ~ 9799158 (-)
AMCG00020123 NA coding upstream 30645 10538282 ~ 10540365 (-)
AMCG00020125 NA coding upstream 37148 10544785 ~ 10550796 (-)
AMCG00020124 NA coding upstream 123655 10631292 ~ 10647839 (-)
AMCG00020132 NA coding upstream 197338 10704975 ~ 10727531 (-)
AMCG00020133 NA coding upstream 266059 10773696 ~ 10779387 (-)
G61052 NA non-coding downstream 300730 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 415322 10085913 ~ 10091086 (-)
G60993 NA non-coding downstream 577542 9927977 ~ 9928866 (-)
G60839 NA non-coding downstream 1203161 9269560 ~ 9303247 (-)
G60833 NA non-coding downstream 1345675 9157927 ~ 9160733 (-)
G61136 NA non-coding upstream 188981 10696618 ~ 10698099 (-)
G61137 NA non-coding upstream 190492 10698129 ~ 10700883 (-)
G61200 NA non-coding upstream 453499 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 454674 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 459543 10967180 ~ 10969599 (-)
G60746 NA other downstream 1666463 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1678299 8812785 ~ 8828109 (-)
G60516 NA other downstream 2943816 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4034974 6467271 ~ 6471434 (-)
G60348 NA other downstream 4039822 6463548 ~ 6466586 (-)
G61170 NA other upstream 247831 10755468 ~ 10756419 (-)
G61269 NA other upstream 1188054 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1494063 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1976732 12484369 ~ 12509937 (-)
G61589 NA other upstream 2490201 12997838 ~ 12998223 (-)

Expression


Co-expression Network