G61136


Basic Information

Item Value
gene id G61136
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10696618 ~ 10698099 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76499
CCCAACTCATTTTTTCCCCTGGTACTTTAAACCCATGGGATCAATATTACATCTCTTCTCCCCCTAGCATCTTTCATTACTGGAGACCTCCTGTTATAGTgcaaagagagggagggaggtgctCTAAGGAACCCTCACGATGCCCAATTTCCACCAGTCCCGCAGAAAAAAAGGGGTACCAACACTAACAcaatttgcaaaaataaataattaaatctatgGAAAGAAACCAGTGTTAACATTCGATAAGCccttaatttaatacattattttacatactgtataaaGATATATAGAGCGTGCCTCTGAAACAACTGGATTGAATGTGCCTGTTGAAAAGggatgtataaaacaaaaaaggcctGGAACTACACCCACCCAGTTTTCATTCCAGAACCACATGATAAAATGTCCTCAACTGAGACTCCCCTACATCCTTTCAAAAGATTCGAAAATTATGGTTTTCATGATTTGTGAAGCGTTGGGAGTGGATGGCTCTTGATGTtggaggaaggagggaggaagCAACACTAAAGGTGTGGAAAATAACTGTGAGGAAATGAAACAAGGCTTATGCAACCAAAATGCGCCAAGTTTGCATGTTGAACCATGTTGGCGAaccttctctctccccttctatCACCTGAGACTCTTTTAGCAGCGAAGAAGACAATTTCAACAAACCAAACGGATCAATAAATGATTGATTCGGGAAATTTTTAGAATCATtcactttttcttctcttcccccGCTCCTTTGGCGAGGCTCTGACACCATGAGAATTCCTTGTCTTTTGAGATGAAGGAcacgaagaagaagaaagaaaggaagaaagcagGAGGCAGAGGACGAGAAGCCCACAATGCGCTTTGGCGTCTGCAGGTAATTCAGTCGATCGCTGCAGGTGGGAAATCTGGCAGAAAAACGTAACCGTCGTAGAAAAGATTCAAAAAAAGGTGGCTAGGGTGTGAACGTGTTTTCTGTGCGTCCCAAACGTGTGTGTGCACGCGTGTGTTTGTGAGTGGGtgggtgtgggtgggtgggtcaaGTTGTCTCCTAAACCAGAGTCCATGCCCCCCCCCAAAGGACCCTACACATCAGTGCTGATGCTCCTGCTTCGTGTGAAGACCTCTTTCATAGTGACAGAACGTGTGAGGTTGAGCTTGTGGAAGCTGGCCAGGTCCATGGGCAGATCCAAGTCCTCCTGCTGGACAGTCCTGTAGCTGATGCGCTCACCTCCGTTACGAAGCCCCTCTGGGTGCTGCAGGTAGAAGGGCAGCTCGTAGTGCGTGCAGTTGGGGCAGTAAGTTCGGGAGCGGGCGAGCTTTCTCGCCAGGGGAGGGGAATAGATAGCAGGACCGTTGGCGGTGGCTGCTGCCGCCGCGGCCGCTACATTGTGGTTGCAGTGCACAGGCGGGAGATGGGAGTGCATGGCAAAGTCCggctcctcctcatcctcctctgaCTCCTCCTTCTTACAG

Function

GO:

id name namespace
GO:0051963 regulation of synapse assembly biological_process
GO:0051965 positive regulation of synapse assembly biological_process
GO:0007416 synapse assembly biological_process

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
TU76499 True 1482 lncRNA 0.48 1 10696618 10698099

Neighbor

gene id symbol gene type direction distance location
AMCG00020124 NA coding downstream 48779 10631292 ~ 10647839 (-)
AMCG00020125 NA coding downstream 145822 10544785 ~ 10550796 (-)
AMCG00020123 NA coding downstream 156253 10538282 ~ 10540365 (-)
AMCG00020117 strbp,LOC107686417,LOC107713322,LOC107685126 coding downstream 434794 10227494 ~ 10261824 (-)
AMCG00020112 NA coding downstream 753542 9931750 ~ 9943076 (-)
AMCG00020132 NA coding upstream 6876 10704975 ~ 10727531 (-)
AMCG00020133 NA coding upstream 75597 10773696 ~ 10779387 (-)
AMCG00020136 NA coding upstream 85265 10783364 ~ 10816925 (-)
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding upstream 236676 10934775 ~ 10943764 (-)
AMCG00020140 mapkap1 coding upstream 400375 11098474 ~ 11109758 (-)
G61098 NA non-coding downstream 188981 10506408 ~ 10507637 (-)
G61052 NA non-coding downstream 490940 10203839 ~ 10205678 (-)
G61027 NA non-coding downstream 605532 10085913 ~ 10091086 (-)
G60993 NA non-coding downstream 767752 9927977 ~ 9928866 (-)
G60839 NA non-coding downstream 1393371 9269560 ~ 9303247 (-)
G61137 NA non-coding upstream 30 10698129 ~ 10700883 (-)
G61200 NA non-coding upstream 263037 10961136 ~ 10961434 (-)
G61201 NA non-coding upstream 264212 10962311 ~ 10962510 (-)
G61203 NA non-coding upstream 269081 10967180 ~ 10969599 (-)
G61206 NA non-coding upstream 294800 10992899 ~ 10993246 (-)
G60746 NA other downstream 1856673 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 1868509 8812785 ~ 8828109 (-)
G60516 NA other downstream 3134026 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4225184 6467271 ~ 6471434 (-)
G60348 NA other downstream 4230032 6463548 ~ 6466586 (-)
G61170 NA other upstream 57369 10755468 ~ 10756419 (-)
G61269 NA other upstream 997592 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1303601 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1786270 12484369 ~ 12509937 (-)
G61589 NA other upstream 2299739 12997838 ~ 12998223 (-)

Expression


Co-expression Network