G61203


Basic Information

Item Value
gene id G61203
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 10967180 ~ 10969599 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76579
taagaagaaaatatttttgcatttattagaCAATTTGAACACAAGTTCACATACAGTGTGCAGATGGAAGCATTtcatgagaaaacaaaagtaacagTTCAATACCTTTTCCTCTTTCCTAACCTCATTCTGTACAAAGATTCTGCTTGCATCATTTTTTAAAGGAGTTACATGAAATTGATTATTATCCCATAATTATTCAGTCAATACAAGTGTATAAAGTAGCACATATGAATGCATAGCCCAAGAGTGCTGGGAAAAATGTGATGGttttcaaaaaaggaaatgaatggTGTACATGGAATACCTACGGATCTTCAACACAGTGCAAAATTGCATCGACTGCATCactaaaaatctaatttaaaatatcaatatgaaattgatcaaatcaaaaacaaaacaaaaaaacatgaaaatcaaaGTTTAGCACAGGGGAGTAAGATGATCATTACATATGATATTAGACACGGCATACTACGAATCCTGAGCCGCAGCACCAGGTAGTGGCTGCAACACTTCCTGAAGGCCATGCACATTGGTCTTATGGCTAGTTTAAATATATGCTGCTCCTAACCAGAGTTCACATAGTCCACAGTCATCCCCTAACGTGCATCAGTATACATTTTCATCTTTCAATCTGCTAAAGATTTGTCAAGAAGCACACTCGATCACTGAAGATTAAACCAACACATGATCCACAATAGAGCCGGATATTAGTCACGGCCCTCCCACCGCTCCCTCTCTATTCACTTCATGCTTcgcttctctctctgctgctggtGCGAAGAGCAGAGCTGAAAACTGGGGGATTCCAAAATTAAAACCaccaaagaaaccaaaaacaatggAATTGCCCTAGGCTTCTGCACCTCGGACAAAAAAGGGATACCAGGGCTATTGAGTTCccattgtacttttttttttttacggtgTCTAGAAACATTTGGCTTGAAGCAGGTGACAGCAATCAAACGGCACTGGACCAACTGCCATTACCATTACAGACTGACAGGACAGATTTCCTTCTATGCGTCTCCAGTGCAACGAAGCAAACAGCCCGTTAGGATACGGAGAACATTGCAGCATCACAGGTGCACGCTGGGAAATTCCTCAGCAGTTATGGGCACTGTGGCTCAGCACTCAGGCACTGGAGAGAAATGCTTTTGGTCTCCTTTGCCTTAACGCAGATGTGCACTACTCTTGACCTGGAGAGCAGAAGCCCATCAGGttttatggtttaaaatgattacaatCAACTGCTTGAGTTAGGTAGTGACGATCTCTTGTGGACTGAAAATCTGACGAAGCTGGTCTCCACGATCCAGCTTTCCTTCAGAGCAGGCAGCCAAACTGCTCATTGAGTACTAATAAATGCAGATTTTTCAGCAAATCCTCATTTTGTTCAGTGAATGCCAATAGCCTTAGAGGTAAGCAGTAATTTAGGCATGgcaaataaaggaaaacagttTGATTTCAATGTAAACAAGCCCTGAATCCCTAACTTGCTGGCAAGACCACGAGGAGAGCAAATACAGGAATCTGTCAGCCCTTGCGTTTGACCCAAAATACTCAATCTACATTTTCAAAGTGAAATAGCATGAAAACTCCACAAgagaaaccaaaaaatacaaacacattcatgtagaaaaaatgattaaaaaagacGAAAGGAAAAAACAGTCACAATGCAAGGAAAAGTACATAATAATGAGGTACCTATTGTTTCAGGAGTGCCTTTAGATAAACAATCCAACATGTCTTGGTCTCTGGAATAAATgggtgaatacatttttaagcaaatgcatttcatgGGAAGGTTCTGTAGATTAGGTATACTccataacattaaataaaagtgcTTGACATTTCAGCAGCTCTGAACAAGATGTATACCTTAAAGGAAAAGCATGCCTTGCAAGTATTTTATAATTaggtcataaaaaaaaaaagtcccattCAATAAacccatttaattaaaattaaagaaaaaagaaaaaatgctgcCCCCCACTGGAAGTCATACTGATAATTTAATCCTGTAGTTTGACTGTAGATGTGAAGACTATCATTCTGGATTATTTGTGATAGGAGCCAAATCAAGGCTGGTGTTTCTCTTTAAAAGTCTAACACAAGACATTGTCCCACCCTGCCAGTACAATGATCCCATGAGTCTGAACATCAGCTCGTTGAAGTTGGACAGAAGGCACAATTACCAGCAAATATCTTACTCGTAATTCAGCCCCCTATGCTTCTTAATTAGTGTTAATTACACATAGAGTCTAGACTAATGCTCAGTTTCTACTGCTTTACAGTAAGAACACTTGAAATGCAATGGGAGAGGTTGGTCTGCAGTGGTATTTCCTCACCAGTTTTGAGTAGCAGTTGTGGAACATTTTAGCATCAGACTTCCCTTAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76579 True 2420 lncRNA 0.39 1 10967180 10969599

Neighbor

gene id symbol gene type direction distance location
AMCG00020135 LOC103036375,LOC107681247,LOC108423724,LOC102294584,LOC107560229 coding downstream 23416 10934775 ~ 10943764 (-)
AMCG00020136 NA coding downstream 150255 10783364 ~ 10816925 (-)
AMCG00020133 NA coding downstream 187793 10773696 ~ 10779387 (-)
AMCG00020132 NA coding downstream 239649 10704975 ~ 10727531 (-)
AMCG00020124 NA coding downstream 319341 10631292 ~ 10647839 (-)
AMCG00020140 mapkap1 coding upstream 128875 11098474 ~ 11109758 (-)
AMCG00020141 mapkap1 coding upstream 175096 11144695 ~ 11162222 (-)
AMCG00020139 mapkap1,LOC107103532 coding upstream 211787 11181386 ~ 11187648 (-)
AMCG00020151 angptl2,LOC106579898,LOC107669255 coding upstream 849126 11818725 ~ 11843715 (-)
AMCG00020155 NA coding upstream 990018 11959617 ~ 11960888 (-)
G61201 NA non-coding downstream 4670 10962311 ~ 10962510 (-)
G61200 NA non-coding downstream 5746 10961136 ~ 10961434 (-)
G61137 NA non-coding downstream 266297 10698129 ~ 10700883 (-)
G61136 NA non-coding downstream 269081 10696618 ~ 10698099 (-)
G61098 NA non-coding downstream 459543 10506408 ~ 10507637 (-)
G61206 NA non-coding upstream 23300 10992899 ~ 10993246 (-)
G61273 NA non-coding upstream 743902 11713501 ~ 11723414 (-)
G61302 NA non-coding upstream 955965 11925564 ~ 11927864 (-)
G61424 NA non-coding upstream 1424686 12394285 ~ 12395028 (-)
G61470 NA non-coding upstream 1461203 12430802 ~ 12451793 (-)
G61170 NA other downstream 210761 10755468 ~ 10756419 (-)
G60746 NA other downstream 2127235 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 2139071 8812785 ~ 8828109 (-)
G60516 NA other downstream 3404588 7440803 ~ 7562592 (-)
AMCG00020019 NA other downstream 4495746 6467271 ~ 6471434 (-)
G61269 NA other upstream 726092 11695691 ~ 11701645 (-)
AMCG00020159 NA other upstream 1032101 12001700 ~ 12052211 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 1514770 12484369 ~ 12509937 (-)
G61589 NA other upstream 2028239 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 2247397 13216996 ~ 13224512 (-)

Expression


Co-expression Network