G61434


Basic Information

Item Value
gene id G61434
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12414999 ~ 12468293 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76858
GGTACATCAAAGGAAAGTCTCCCTGCCCCAAGTCTATACAACTGCACccggattaaaaaaataagtaatggctCTAAGAATCTGCTTGTGAGGAGGGAAGTGGTTAGGAGACCAAGATTGTCAGTTGTGCAGAATTCCAGGGCCTGCATCTCGCCCGAGTGCATGGAGAGAGAGGCCCAgagtaatacacatttttatggGAAAGTAGCACTCAAGCCATAGCACCGGTCTCATTGGCTTATCTGCTGTAGTTCCTGATTTAGTGGCAACTTAAAATACCAGGCTGATATCTCCTACTGGAAATGACTGATGAGACTGAGTAGAGTATGAGTCCCAGTTTAGCTGCTTCAGGGGCTGAGAAGCTGTGCTGGTTATAAATGCCCTTGAGCTGCCCACAAAGGTCTAATGGGGTGGGATACCTAGAGTTTTGTTTATACAGATAACTTATGGAAGAGAgtccagttttgtttcttttgatgtTCCTCTATTAAGTTATTTAGCAGGATTCTTTACTTGACtgcagttttactttttataatttaaacttttcCAGTATTTCAGCTGAACTTGATTGATGACTGAAAGTATTAATTTCTGCCATCCCTTTTAGGAGAATAACTGAGATCCAAATTATTCAGTTGCTTACAGAAAGAggaccattgttttttttttttaagaaatcccTGAATCATTGCTGTATCCTGGTACACCATTGTAATTTAGCAGCTGCTCTGTTGTTGCTAAGGCATCACTTGAGTAACAATActctataaataaacaagcagcCCTCACAGGAGGAGGAGACTGGGAGAGATGGGGGAGTACAGTGTCCTCAACTAGGATAGGTAAAATATAGGTGGGGGGAGAGCTCCCTGCAAAGTCTGGGGACACAGATGAGGTCAGAATCCAATACCATGCTACATGTTAGCAGGGATCACGGAGTTTTGATAAAACTCAGGTTCCCAATTGTGGACATGATGCCTGCTTTTCTGAGAGGAATAAAGCCAGTTGCCCCCCTCCCTTCTCAAAAAAAGTAAAGTACTTATGAGCAAATCTAACTGTAGCCCCACAGATCACCACTAGGCTCCAGCACTGAGCACTATCCTGGTTTGTGGTGGTTAGAGAGCACCAGATCTGCACCGTGGTGAGGTtcagctgtgcattttaaaagctttggtTTACAGAGACTTCTATcattatacaatttttttttttttttttttttctttttttctttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76858 True 1240 lncRNA 0.42 2 12414999 12468293

Neighbor

gene id symbol gene type direction distance location
AMCG00020172 NA coding upstream 19959 12381813 ~ 12395040 (+)
AMCG00020166 NA coding upstream 43287 12368773 ~ 12371712 (+)
AMCG00020165 NA coding upstream 212312 12200128 ~ 12202687 (+)
AMCG00020163 ptpa,LOC102782294 coding upstream 216352 12185834 ~ 12198647 (+)
AMCG00020157 NA coding upstream 242993 12157541 ~ 12172006 (+)
AMCG00020169 NA coding downstream 11611 12479904 ~ 12481905 (+)
AMCG00020176 NA coding downstream 94867 12563160 ~ 12564443 (+)
AMCG00020182 NA coding downstream 182866 12651159 ~ 12651764 (+)
AMCG00020181 NA coding downstream 183923 12652216 ~ 12654743 (+)
AMCG00020187 NA coding downstream 196615 12664908 ~ 12690345 (+)
G61338 NA non-coding upstream 285428 12126842 ~ 12129571 (+)
G61336 NA non-coding upstream 398252 12016496 ~ 12016747 (+)
G61335 NA non-coding upstream 398848 12015698 ~ 12016151 (+)
G61333 NA non-coding upstream 402592 12011960 ~ 12012407 (+)
G61332 NA non-coding upstream 403123 12011661 ~ 12011876 (+)
G61440 NA non-coding downstream 16084 12484377 ~ 12504599 (+)
G61460 NA non-coding downstream 113968 12582261 ~ 12585656 (+)
G61568 NA non-coding downstream 361679 12829972 ~ 12852064 (+)
G61588 NA non-coding downstream 529557 12997850 ~ 12998227 (+)
G61650 NA non-coding downstream 868703 13336996 ~ 13338088 (+)
AMCG00020171 rpl12 other upstream 48 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1114967 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1445401 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1659624 10738502 ~ 10755375 (+)
AMCG00020122 urm1 other upstream 1915493 10480534 ~ 10499506 (+)
AMCG00020177 NA other downstream 51471 12519764 ~ 12542261 (+)
G61491 NA other downstream 147499 12615792 ~ 12619817 (+)
G61675 NA other downstream 881384 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1318721 13787014 ~ 13792944 (+)
G61894 NA other downstream 1364877 13833170 ~ 13834832 (+)

Expression


Co-expression Network