G61470


Basic Information

Item Value
gene id G61470
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12430802 ~ 12451793 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76910
CAGCATTTCAATTTGACATCCACTCTGAAACTGGATGCTACACCAAGACAATAAAATTTAACCATAGAATGCACAATAactttatgaaaaatatttacacattcccccccttccccttaACTGTCCCCTCACCTACCCCATCCCACCCCAacccccactcccactcccaccaGAGAACTCCAAAAAAGCATTACACAGTCAGAGGAtcacagagaggaaaacagCGCCGCCGTAGAGGAGGAGAGATTCCCGCTGCACTTTGCCTGTGCTCCGTTACAACACTCATCAGTACCCAGAGTTCCCATCTGGCTTCTGGGATTCTCCTCCGTGTTCTCGCCGCGCTCCCAGTTACATGACTAGGCGCACACAAGAAAAAGGGTTGAAAACTTTGAAAGGTCGAACGTTCCAGAACCCAAAATGGTCAGGGTAACTTGCTGCTTAAAATCCAAAGGGGGGagaaataagaataaaacaaattatgaagCTTATCTGGGAGAATGTTCAGGGTTGGTTGCAGTTTGACCACTTTTCATTCCAACTGCTGCACTCATCTACTCTATTAACCAGGTTATGTTGACGTCTATAACACAGCCGGTTCCTCGTCTGAAAGCATGCGTGACGTGGGAGAGCAGGGGAGGTGGGGCGGACCATCTTGGACCCCcaaagatgtgttttttcttgggCACTTGTGTTTCTCTCAGATATTGAGGGAGAgaaggggagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76910 True 724 lncRNA 0.48 2 12430802 12451793

Neighbor

gene id symbol gene type direction distance location
AMCG00020175 pole3,LOC107587393,LOC107693859,LOC107597112,LOC107691032 coding downstream 12574 12414984 ~ 12418228 (-)
AMCG00020174 NA coding downstream 21850 12395555 ~ 12408952 (-)
AMCG00020168 NA coding downstream 49053 12376133 ~ 12381749 (-)
AMCG00020167 NA coding downstream 55654 12371831 ~ 12375148 (-)
AMCG00020164 ier5l,LOC107691035,LOC107723335,LOC107740934,LOC107693861 coding downstream 223250 12206692 ~ 12207552 (-)
AMCG00020179 NA coding upstream 65013 12516806 ~ 12529593 (-)
AMCG00020178 NA coding upstream 98777 12550570 ~ 12562984 (-)
AMCG00020185 NA coding upstream 145866 12597659 ~ 12598234 (-)
AMCG00020184 NA coding upstream 166807 12618600 ~ 12619814 (-)
AMCG00020186 NA coding upstream 189914 12641707 ~ 12646647 (-)
G61424 NA non-coding downstream 35774 12394285 ~ 12395028 (-)
G61302 NA non-coding downstream 502938 11925564 ~ 11927864 (-)
G61273 NA non-coding downstream 707388 11713501 ~ 11723414 (-)
G61206 NA non-coding downstream 1437556 10992899 ~ 10993246 (-)
G61203 NA non-coding downstream 1461203 10967180 ~ 10969599 (-)
G61477 NA non-coding upstream 42008 12493801 ~ 12499426 (-)
G61488 NA non-coding upstream 126878 12578671 ~ 12583748 (-)
G61550 NA non-coding upstream 267574 12719367 ~ 12743437 (-)
G61558 NA non-coding upstream 352877 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 555629 13007422 ~ 13007666 (-)
AMCG00020159 NA other downstream 378591 12001700 ~ 12052211 (-)
G61269 NA other downstream 729157 11695691 ~ 11701645 (-)
G61170 NA other downstream 1674383 10755468 ~ 10756419 (-)
G60746 NA other downstream 3590857 8839211 ~ 8839945 (-)
AMCG00020066 fam69b,fa69b other downstream 3602693 8812785 ~ 8828109 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other upstream 32576 12484369 ~ 12509937 (-)
G61589 NA other upstream 546045 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 765203 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 1143725 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 1212283 13664076 ~ 13665592 (-)

Expression


Co-expression Network