G61488


Basic Information

Item Value
gene id G61488
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12578671 ~ 12583748 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76944
cctccctctctctcctgaagCAAATTGCTCCCCCTACGCAAGTCGCCAGAAGGGGGATGTGAgctaaaaaaaatcacattgcaacttttttttccccacttttttctttctttctttcttcttttcccctCAACTACTTCTTCCTGGTGAATGTGCACATTCCCCGATACATGGGAAAGAGCAGAGGGACGCAGTCGCGTTGATTTTTCGTTTCTTCTCCTGCTTCTTCTAACACGACGATCTGGGATTCAAAGTAACAATGTTCTGCAGATCTGGCCGCACTCGCTGAGGGAGCAGAAAGGAGGCTCGGAAAACACATCTGATCCAGGGATCGCCGGCGCATCGAGCTGCAGATACTAACAGGAAGAGCCTGCaaagaacaggaagtgatatCACCTGCGGTGCCCAATTCCTTTTTCTCCAATCAGAGCGCAGAGCCCGGGTGACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76944 True 449 lncRNA 0.49 2 12578671 12583748

Neighbor

gene id symbol gene type direction distance location
AMCG00020178 NA coding downstream 15687 12550570 ~ 12562984 (-)
AMCG00020179 NA coding downstream 49078 12516806 ~ 12529593 (-)
AMCG00020175 pole3,LOC107587393,LOC107693859,LOC107597112,LOC107691032 coding downstream 160443 12414984 ~ 12418228 (-)
AMCG00020174 NA coding downstream 169719 12395555 ~ 12408952 (-)
AMCG00020168 NA coding downstream 196922 12376133 ~ 12381749 (-)
AMCG00020185 NA coding upstream 13911 12597659 ~ 12598234 (-)
AMCG00020184 NA coding upstream 34852 12618600 ~ 12619814 (-)
AMCG00020186 NA coding upstream 57959 12641707 ~ 12646647 (-)
AMCG00020183 NA coding upstream 74565 12658313 ~ 12664512 (-)
AMCG00020188 NA coding upstream 170109 12753857 ~ 12759226 (-)
G61477 NA non-coding downstream 79245 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 126878 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 183643 12394285 ~ 12395028 (-)
G61302 NA non-coding downstream 650807 11925564 ~ 11927864 (-)
G61273 NA non-coding downstream 855257 11713501 ~ 11723414 (-)
G61550 NA non-coding upstream 135619 12719367 ~ 12743437 (-)
G61558 NA non-coding upstream 220922 12804670 ~ 12805433 (-)
G61593 NA non-coding upstream 423674 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 753268 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 863254 13447002 ~ 13450062 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 68734 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 526460 12001700 ~ 12052211 (-)
G61269 NA other downstream 877026 11695691 ~ 11701645 (-)
G61170 NA other downstream 1822252 10755468 ~ 10756419 (-)
G60746 NA other downstream 3738726 8839211 ~ 8839945 (-)
G61589 NA other upstream 414090 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 633248 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 1011770 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 1080328 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 1221272 13805020 ~ 13808333 (-)

Expression


Co-expression Network