G61491


Basic Information

Item Value
gene id G61491
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12615792 ~ 12619817 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU76948
GCTTGCATACCAGCACGCACCCTGCCAAACAGCACAAAACAGACAACAGAAATAGACACAAACATCGTAGCATTGCAGGTGCCAGTTCTGTGTGCTAAAGAGCAGTACCATTCATTCGACTAACAGTCTCTCCAGCCCTAGAGGGCCTCAGTCTGGCAGTGTTCTGCTCCTGCTCACCTGCATGTGAGCTAGGACAACAGTTCACAATGGGTCAGTTGATTCATCAGTTTAATTGACATTGTACGAGCTGATTAGGGGGAATGTGCACCAGGTCTCTCTATCTGGGCTCAGATCTGAAGACCTCTTCATCTGTGGCAAGATCAAACGGATATGTGGGTAGGATTCCATACATTTGTCATTGCAGCccatcagtcagtgtgtcagtcatcCCTGGACTGCACAGTGCAGAGGGCCCGCCCCTAACTCACAGTGACTCAGTGTGCTTGTGTGcaagagtgtgtgtttgtgtgtttttctgtgtgtgtgagtgtctctttgtgtgtgtttgtgattctctgtgtctgtgtctgtgtgtatatgtgtttctGTGAGTGAGACTCAGGCTGCCTTAGGACTCCTTGTCCATTCCAGTGCAAGTCTTAATTAGCAGGGTGATTTTCAGTAGCAAACCCAATTAAACAATTGACGTTCAAAGGATTGAAAAGGCCTTAGCTGACCTGCATGGAAGTTTGATGACGTCATGGTTTTCTCTGCAGCTTGGTAAACTGACAAAGAATGGTTCTTGGAGTGGAATTTTACTTGCACTCTGGGCAGGAAGTGTGGGAATAACAGTGTCAAATAACACTGAGTCTTGTGAAAAAGGTgtacagaagagagagagagagagagagagagtaaaaatAGACCCAGGAAGGCTAACAaaagaaaccttttttaaatatttatcaagaTGTAGTTTGTGTCCAAGCCACAGCCTTCGCAGACAGTTAGATGCTCACAAGCTGGTTATCAAGTTGCATGTAAAACGATAGCCTCAAAAGATACAACAGATGTAGCGTGTGAAACCCTAGTTGTCAGTGAGAGTATAAATTAATTCCTCTCGTGTTCAGTCCTAGGCTGTAACACTAGGCTATAGCAACTGTAATTCATCCTTGTGGTAGTTGAGAACAGAGGGATTATTCAAGAGTATTGATCACCCTGTAAAtgtgtgtgtttttgtgtatttgtgagtgagtgagtgtgtgtgtgtgtgtgcgcgtgaTATGATACAATGTTAAGAGTTTGATTTTCCttgaaagtggaaaaaaaaaaagaataaattaattaatgctaaAGAATGTAACcggatttgaaaataaagaatcaTTCTAGAATCTAGAAagttatttacaatatttttgccGAACTTTTCCAGCAGCTCAAAtgtgagatttttattttttcgaaTCCACGTCCTCCTTGTCTCTCCCAGCTTGAACAGAGATACATCACCGTTTCTCTCCACTGACAATGTCTCATCCCCTCCAACCCCCAGCGAGTCTGCTCTTCAGTCaaaaaatttattaaaaacaaaaatcccacTCTGCAGATCCACACCAAGTGCCCGTTGAGAGGTCCACATAAGCAACCTTCTCCATCCGTGTTCAAATACGGCCAAGCATAAGAGGGAGTGGAGTGGGTGGCATTTCCAGGCGAGAGCTTGTTCCAACAACAACCCCTGTCCTCTTGAACACTTTCCTGGTTGTCTTCTCAAGTCAGACTGCGATATCATAGCAGATTGACCTTTCCCACCACCTGCTTGCAGCCGTTCCTGGAGTACTCCCGGTTACCTGCCGTGTAGTAAGAAATCTCAGCGGCCAGGCGCTCAATGTGGGAGGTGTCCGGGTAGAAGCCCTCCCGCGTCATCTCGTCCAGGAAGCACTCCATGACATGGCTCTTTTCCAGCAGCCACATGGGGACCACATCCGTGTCTGCCCACAGAGGGTGGTAGTGGACCAGGGAGCGCTTCACCTGCCTGCCCAGCTCCTGGGTCAGCTTCTGTTTGCCCAGAGAGTCGTTGCTGGAGGAGTTCTGCAGGACAAATTTGGTGATCTCCGCCTGGCCGATGTTGCTGATGAGCACGTAGACAGCATTGAGGTACTCGTTGGTCTGGTTGGCACGGAAGAAGCCCTGCAGGTACTCCAGCAGCGGGCTGTGCATGAACTCCACCTCATCAAAGATGAACACCGGGATCTTCTCCTCTGCCTCAGCCCGGTTTACCATGTCTGAGATGCGGGTGGCCAGCTCCTGGGCGCAGTGCGGGGCATTCTCCTCCAGGGGGCAGTGATGGAGCATGAAGTACTGCAGCACCAGCTCCTCACTAGCCACCGAGCGGAAGTGGCGTGCCAGGATGCGGCCCAGATGGCTCTTACCCACACCACTCGGGCCGTTGATGGAAATAACGAGTGGCTTGTTGTGGACATAGGTGGAGAGGTAATCTGACAGCAACTCCAGGATGCTCTCTGCTGCCTCCCTCTGGCCGAACACCTCACGCTTTAGTGTCTTCTCCAACCCCTCCAGGTCGTACCTTTGCAGGTGATCATCCAGGTTCTCGATGGCGTTGTACACCTGCACGCACACAATGATGCTGAGTAGGAACAGGCAGTTCTTTGCACGGCTACGTTCCTTGGCGGGCAGGTACCGCCGACCATCATTGGGGAACATGACTCggttcctcttcttcttctttctcttgCGTGGGCTGCCACCACTAACGGGCAGCTGGTCAAAGGTGAAGATCTCTGGACCCGTGGGCCGTGGCAGCAGTCCAGACCGGGGCAGCTCCCCACCCAGCTCCGCCCTTCGTTTCTTCATCACCTGGTACTTGCGCCGGATGCGGACCATAGCGCGCAGCTTGGAGGAGAAGTTGGAGATGCTGGGAGCAGCCGTCTCCGTCTGGCTCTCCTCCTCCATCGCACTCTCTGATGTGTCCAAGTCAGCCATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76948 True 2946 TUCP 0.50 3 12615792 12619817

Neighbor

gene id symbol gene type direction distance location
AMCG00020176 NA coding upstream 51349 12563160 ~ 12564443 (+)
AMCG00020169 NA coding upstream 133887 12479904 ~ 12481905 (+)
AMCG00020173 lmo41,LOC105911081,LOC108260376,LOC106585438 coding upstream 163007 12448768 ~ 12452785 (+)
AMCG00020170 NA coding upstream 184640 12428416 ~ 12431152 (+)
AMCG00020172 NA coding upstream 220752 12381813 ~ 12395040 (+)
AMCG00020182 NA coding downstream 31342 12651159 ~ 12651764 (+)
AMCG00020181 NA coding downstream 32399 12652216 ~ 12654743 (+)
AMCG00020187 NA coding downstream 45091 12664908 ~ 12690345 (+)
AMCG00020191 nrarpa,nrarp coding downstream 115058 12734875 ~ 12735213 (+)
AMCG00020192 NA coding downstream 182241 12802058 ~ 12815332 (+)
G61460 NA non-coding upstream 30136 12582261 ~ 12585656 (+)
G61435 NA non-coding upstream 109193 12417810 ~ 12506599 (+)
G61440 NA non-coding upstream 111193 12484377 ~ 12504599 (+)
G61434 NA non-coding upstream 147499 12414999 ~ 12468293 (+)
G61338 NA non-coding upstream 486221 12126842 ~ 12129571 (+)
G61568 NA non-coding downstream 210155 12829972 ~ 12852064 (+)
G61588 NA non-coding downstream 378033 12997850 ~ 12998227 (+)
G61650 NA non-coding downstream 717179 13336996 ~ 13338088 (+)
G61668 NA non-coding downstream 721136 13340953 ~ 13341315 (+)
G61669 NA non-coding downstream 721662 13341479 ~ 13341699 (+)
AMCG00020177 NA other upstream 73531 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 200841 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1315760 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 1646194 10945592 ~ 10969598 (+)
AMCG00020129 tmem8c,LOC107720238,LOC107587553,LOC107699700,LOC107567143 other upstream 1860417 10738502 ~ 10755375 (+)
G61675 NA other downstream 729860 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 1167197 13787014 ~ 13792944 (+)
G61894 NA other downstream 1213353 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 1243660 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 1263008 13882825 ~ 13885116 (+)

Expression


Co-expression Network