G61558


Basic Information

Item Value
gene id G61558
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12804670 ~ 12805433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77034
AAAACGTTGTTGTAAGGCCGTGCGAAAACACGTTCGTTGAAATAATAACGCGAATATGTTCAGGAAGGGTGTCTCTAATACAATCAATTTTAGAATATGAAATTAATCCGGTTTTCCTTAGTTTATATACATAGAGAAAAAGCGCCACTTGAACGCTTtacaatcccacaatgcaccgctTCGGCTAAGACGGAAGTTTCCCTGTGAAATAGGCGGGTTGATGGTCTGGTGCCGCgctgtttgaatGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGAcatgtttttatcattatatttgaACATGTGTGTTTAGGGAGGAcatgtttttatcattatatttgaACATGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGACatgtttttaacattatatttgaaCATGTGTGTTTAGGGAGGACATGTTCTTGAACattgagtatgtgtgtgtattattatctTCCAAGCTTGTTCCAGTTTTCGCTAGATGGTAGGTAGGGACATTCAGAATctcattaatgaattaataataatgaagaagaaaTGGGGATGTTTGTGGGTTAGTGAAATGCATGCAGTGTACTGCATCTACATACATCGCGCAGCAGCACAACGATGTTGGAAGTAAAGCGGTTTCAGATACAGTAGGTGGCGACATTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77034 True 719 lncRNA 0.38 2 12804670 12805433

Neighbor

gene id symbol gene type direction distance location
AMCG00020193 LOC100195200,LOC107681237,LOC107715755,LOC107709843 coding downstream 14110 12782323 ~ 12790560 (-)
AMCG00020189 NA coding downstream 28254 12766665 ~ 12776416 (-)
AMCG00020190 NA coding downstream 38286 12762409 ~ 12766384 (-)
AMCG00020188 NA coding downstream 45444 12753857 ~ 12759226 (-)
AMCG00020183 NA coding downstream 140158 12658313 ~ 12664512 (-)
AMCG00020196 NA coding upstream 4041 12809474 ~ 12810528 (-)
AMCG00020195 NA coding upstream 5230 12810663 ~ 12813210 (-)
AMCG00020194 NA coding upstream 13497 12818930 ~ 12827022 (-)
AMCG00020198 NA coding upstream 75231 12880664 ~ 12887861 (-)
AMCG00020197 NA coding upstream 84208 12889641 ~ 12898257 (-)
G61550 NA non-coding downstream 61233 12719367 ~ 12743437 (-)
G61488 NA non-coding downstream 220922 12578671 ~ 12583748 (-)
G61477 NA non-coding downstream 305244 12493801 ~ 12499426 (-)
G61470 NA non-coding downstream 352877 12430802 ~ 12451793 (-)
G61424 NA non-coding downstream 409642 12394285 ~ 12395028 (-)
G61593 NA non-coding upstream 201989 13007422 ~ 13007666 (-)
G61696 NA non-coding upstream 531583 13337016 ~ 13338101 (-)
G61729 NA non-coding upstream 641569 13447002 ~ 13450062 (-)
G61803 NA non-coding upstream 772976 13578409 ~ 13653379 (-)
G61872 NA non-coding upstream 945651 13751084 ~ 13751298 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 294733 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 752459 12001700 ~ 12052211 (-)
G61269 NA other downstream 1103025 11695691 ~ 11701645 (-)
G61170 NA other downstream 2048251 10755468 ~ 10756419 (-)
G60746 NA other downstream 3964725 8839211 ~ 8839945 (-)
G61589 NA other upstream 192405 12997838 ~ 12998223 (-)
AMCG00020212 NA other upstream 411563 13216996 ~ 13224512 (-)
AMCG00020230 NA other upstream 790085 13595518 ~ 13596917 (-)
AMCG00020229 NA other upstream 858643 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 999587 13805020 ~ 13808333 (-)

Expression


Co-expression Network