G61588


Basic Information

Item Value
gene id G61588
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12997850 ~ 12998227 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77088
tgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacgtgcccattgtaggcactttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77088 True 378 lncRNA 0.52 1 12997850 12998227

Neighbor

gene id symbol gene type direction distance location
AMCG00020192 NA coding upstream 182518 12802058 ~ 12815332 (+)
AMCG00020191 nrarpa,nrarp coding upstream 262637 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 307505 12664908 ~ 12690345 (+)
AMCG00020181 NA coding upstream 343107 12652216 ~ 12654743 (+)
AMCG00020182 NA coding upstream 346086 12651159 ~ 12651764 (+)
AMCG00020206 NA coding downstream 250530 13248757 ~ 13255291 (+)
AMCG00020213 LOC102780640 coding downstream 305183 13303410 ~ 13330177 (+)
AMCG00020218 NA coding downstream 438515 13436742 ~ 13451791 (+)
AMCG00020217 pou5f3 coding downstream 458452 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 515327 13513554 ~ 13516767 (+)
G61568 NA non-coding upstream 145786 12829972 ~ 12852064 (+)
G61460 NA non-coding upstream 412194 12582261 ~ 12585656 (+)
G61435 NA non-coding upstream 491251 12417810 ~ 12506599 (+)
G61440 NA non-coding upstream 493251 12484377 ~ 12504599 (+)
G61434 NA non-coding upstream 529557 12414999 ~ 12468293 (+)
G61650 NA non-coding downstream 338769 13336996 ~ 13338088 (+)
G61668 NA non-coding downstream 342726 13340953 ~ 13341315 (+)
G61669 NA non-coding downstream 343252 13341479 ~ 13341699 (+)
G61670 NA non-coding downstream 344453 13342680 ~ 13343013 (+)
G61671 NA non-coding downstream 344916 13343143 ~ 13343381 (+)
G61491 NA other upstream 378033 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 455589 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 582899 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 1697818 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 2028252 10945592 ~ 10969598 (+)
G61675 NA other downstream 351450 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 788787 13787014 ~ 13792944 (+)
G61894 NA other downstream 834943 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 865250 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 884598 13882825 ~ 13885116 (+)

Expression


Co-expression Network