G61650


Basic Information

Item Value
gene id G61650
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13336996 ~ 13338088 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77173
TGTTTAGTACAAAAATTTTATTGTGTACAAAATATGATCTCTTGCCTCATTCTTTACACGATTAAAAAAAGTAGAAACGCTACAGGGACACACACTTAAGACTCCCATAAAAATATGTGAACAACAAGGAACTACAATTagaaaaatactgttaaaaaacacaaaaagctatTAAAAAAAGAGTTCAGTGCTGTTGCTTGTTATTGCTTTCATtagcagaaaaatatattgtaaatggtCACTGGTCACAcagatgtaaaaaacaaaaaacaaaaaacttttgttaattaaatcttCACATTACATCTGTGCAGCAGCAGTTCACCAGGGAAGGGTGTCCATGGGCACAATGCAGGAAAGACTAAAGTGCACAGAGTCTCTGGAATGGCTATTGAACAGCTCGGTCAGGCTGACTGCAAACACACCAGCCTAATGCAAAGAACTTCCCAATTATaccttcacacacaaaaaactaccTCCAGCCCAAAGGCAAGTGGCCTTGtgtagagaaaacaaacaatgttaCTAACAACACAAccgaaaacaaataaattattaagacAATGGAGAGAAAGGATCCACAGAGTTTACGCAGAAGAGCTGCAGGGAAATCCGTCCAGAGCTCGATTATGATTGGCTACGAGTTAAATTTAGCCAatgggaaggggaggggggtgggacAGGGGTTCTGAAGAATTTCCACTGTACGTCCATTACaaaaattcagaaaacaaaagaaacaaacatatttgtCAACAGGCATCAGGAGCAGCAAACTGGCCAAGCTCAGACTgtagattacatttattattagtagtagtattattattaagcagacaattaaataaaacacgcttgaaaacatgaaaaggtgTGCATTTAAACACCTGCCTGGTCTTTACGGGGGCCAGAGCCTAGAGAACGAACCCGTAATGACTGAGGTAGAGAGAATGGAGGGAGGGGCTGCACCTGGCTGGACCCCACCCCTACACCTGCTGGGGAGTCAACCCTGGTCTGAGCCAGCGAGGGGAGCGGAAGGCTCTGCTTTCTCAGGCCTGGGGAAAGGCCATCCATTTGATTTTTTTGAATCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77173 True 1093 lncRNA 0.41 1 13336996 13338088

Neighbor

gene id symbol gene type direction distance location
AMCG00020213 LOC102780640 coding upstream 6819 13303410 ~ 13330177 (+)
AMCG00020206 NA coding upstream 81705 13248757 ~ 13255291 (+)
AMCG00020192 NA coding upstream 521664 12802058 ~ 12815332 (+)
AMCG00020191 nrarpa,nrarp coding upstream 601783 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 646651 12664908 ~ 12690345 (+)
AMCG00020218 NA coding downstream 98654 13436742 ~ 13451791 (+)
AMCG00020217 pou5f3 coding downstream 118591 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 175466 13513554 ~ 13516767 (+)
AMCG00020223 abca2 coding downstream 207323 13545411 ~ 13579175 (+)
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding downstream 245193 13583281 ~ 13585950 (+)
G61588 NA non-coding upstream 338769 12997850 ~ 12998227 (+)
G61568 NA non-coding upstream 484932 12829972 ~ 12852064 (+)
G61460 NA non-coding upstream 751340 12582261 ~ 12585656 (+)
G61435 NA non-coding upstream 830397 12417810 ~ 12506599 (+)
G61440 NA non-coding upstream 832397 12484377 ~ 12504599 (+)
G61668 NA non-coding downstream 2865 13340953 ~ 13341315 (+)
G61669 NA non-coding downstream 3391 13341479 ~ 13341699 (+)
G61670 NA non-coding downstream 4592 13342680 ~ 13343013 (+)
G61671 NA non-coding downstream 5055 13343143 ~ 13343381 (+)
G61672 NA non-coding downstream 5669 13343757 ~ 13344039 (+)
G61491 NA other upstream 717179 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 794735 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 922045 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2036964 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 2367398 10945592 ~ 10969598 (+)
G61675 NA other downstream 11589 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 448926 13787014 ~ 13792944 (+)
G61894 NA other downstream 495082 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 525389 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 544737 13882825 ~ 13885116 (+)

Expression


Co-expression Network