G61672


Basic Information

Item Value
gene id G61672
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13343757 ~ 13344039 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77197
CTGAGGGAGCGCTGTCTTGTTTCGGCGTGCTGCGCTGGGGGGCGGGTGCTCGGTCTCTGTAGCGCCGTTCTCCTCCACGCTGGTCAGGCTGCTGCTGCGAGATTTGTGGCCACCCCCTCTAAAATCCCCACCGTCGATAGAGGCCACACCCACAGAACCTGGCCCCTGTTGCCCCGAAGACGATGAGGAGTGGGGGTGGGGCTCCTGAAGGAGAGACTTTGATTGGTTCCTCAAAGAGCCATGAAGCGGATCCATCAGCCCATCCTGAGTTTCCATTGGATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77197 True 283 lncRNA 0.60 1 13343757 13344039

Neighbor

gene id symbol gene type direction distance location
AMCG00020213 LOC102780640 coding upstream 13580 13303410 ~ 13330177 (+)
AMCG00020206 NA coding upstream 88466 13248757 ~ 13255291 (+)
AMCG00020192 NA coding upstream 528425 12802058 ~ 12815332 (+)
AMCG00020191 nrarpa,nrarp coding upstream 608544 12734875 ~ 12735213 (+)
AMCG00020187 NA coding upstream 653412 12664908 ~ 12690345 (+)
AMCG00020218 NA coding downstream 92703 13436742 ~ 13451791 (+)
AMCG00020217 pou5f3 coding downstream 112640 13456679 ~ 13461481 (+)
AMCG00020225 NA coding downstream 169515 13513554 ~ 13516767 (+)
AMCG00020223 abca2 coding downstream 201372 13545411 ~ 13579175 (+)
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding downstream 239242 13583281 ~ 13585950 (+)
G61671 NA non-coding upstream 376 13343143 ~ 13343381 (+)
G61670 NA non-coding upstream 744 13342680 ~ 13343013 (+)
G61669 NA non-coding upstream 2058 13341479 ~ 13341699 (+)
G61668 NA non-coding upstream 2442 13340953 ~ 13341315 (+)
G61650 NA non-coding upstream 5669 13336996 ~ 13338088 (+)
G61674 NA non-coding downstream 4816 13348855 ~ 13349146 (+)
G61676 NA non-coding downstream 7209 13351248 ~ 13351534 (+)
G61774 NA non-coding downstream 251475 13595514 ~ 13596726 (+)
G61841 NA non-coding downstream 364796 13708835 ~ 13709496 (+)
G61871 LOC100846954 non-coding downstream 407048 13751087 ~ 13751363 (+)
G61491 NA other upstream 723940 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 801496 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 928806 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2043725 11274024 ~ 11300032 (+)
AMCG00020134 rabl6 other upstream 2374159 10945592 ~ 10969598 (+)
G61675 NA other downstream 5638 13349677 ~ 13350712 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 442975 13787014 ~ 13792944 (+)
G61894 NA other downstream 489131 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 519438 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 538786 13882825 ~ 13885116 (+)

Expression


Co-expression Network