G61803


Basic Information

Item Value
gene id G61803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13578409 ~ 13653379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77364
aaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatgtaaaaaTTCATAGGGATCTCACATTTCTAGCACATGCTAAATATGTCAATTTGATCTGTATGGGAAACTGCAGCCTAACACTACACTGCCACAGCAGCGGGGACACAAGGCCGCTGAAACCAACATGactcaaaagaaaaaattaaagctCTAGTAGTTGAATGAGAATATGTTTATAGCAGAGACTGCAGCACATCTTATACACACCAGCTGTGACAACCAAGCACCAGAGCTGACCGACTGAGCATTGATATGCACACGTGTGTGTATGcctgtgggtgggtgtgtgtacACAGCCTGTCTGTAGCGGGTTTCTCTGGACACGACTGGATCAGAGGAGTGTCTGTGGTCAATAAGTTACTGGAGCGACTGAGGGAGATATGGatagagaaagagggaggagagtgtgagagacagggagagggatggagagagtgtgagagggGAGGAGAGTGATGAAGGGGCACTAAACACCGCTCCAGTAACCTGTGGCACCTGTGCTGCAGCGCATCTCTGTCTCCAGCAACCCAGGGAAGTCCATCAGAAAAACAGGCTACACACTGGGAGCGGCCGGATGGTGCAGCGGGGGCGTAGCACAGTGCTCAGTTGTCACAGCTTGTCTATATACAGTTTACAGGTGTACTGTTAGGTAACcgcagatagatagatagatagatagatagatagatagatagatagatagataaataaataaatagaacacAAATCAGGTGCAGCTCGGTCTGGGTCCGACTAGAAACACGAAGGGGATCCAAAAGGCCAGTCAAAGGTTCAGAGTTTGAACATTTGAGGGTCATTCAAAGGTCATCCCAAGGGTCAAAGGTTGAAGTTCACGACCCCGTAGGGTCAAAGTTCACTGCAATCCAAAGATGACAGTTTGTGTGTTGCTTTGTCATCCccatcccctccccctccccctccccctccctcgcCGCCTCCAATGCACAGGTGAAAGTTTAAAGTTCGCGGCaatccaaaaagaaaatgtgagtgTCACGGGTTAAAGGTACAAGGTcatgctgatttattttttccctgtaaGGGAGGGGGGTCAAGGGTAATAGGTCACTCAGTCCCAGGCAGACATGGCTGCTCTGATGTTTCCCATTATGTACAgctaaattgtttatttttttgtttgtttgtattttattattatttttttacaaatttatACCTTTTACAATGAAAATAGAAATCCAAGATGCCGTTAAAATGTCCCCCCCCCGTCCCCTACATTCTTTGTtcctttatattaaacaatgtatcattttaattttcattcagtgatttacatttacattttcccttttggtgaaacacaatcatttacagttaaaagtcagagagagtcagagagagagggagagagagagcagagtgTCAGTCTGCCCGTCACTGTTAGTCTGCAGTGATGTCACAGACTTGGGCTCCGGGGTCCTAGATCAGAGAGCATTCCACTCCACAAACATCACCTGACCCAccaaacacattcatacacacactgtcGCACACACATTATCGTAAACGCagtctcacagacacacacactttctgcTTCTCTTcttctatccctctctctctcctcttccccctctactctctttctctccattcaacacagtgtgtctgtgttgaatGACAGCTGGGcctggggaaagaaaaaaagggagggagagatagag

Function

NR:

description
PREDICTED: uncharacterized protein LOC109108415

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77364 True 1758 lncRNA 0.45 2 13578409 13653379

Neighbor

gene id symbol gene type direction distance location
AMCG00020220 NA coding downstream 107553 13469810 ~ 13470856 (-)
AMCG00020219 NA coding downstream 150998 13408705 ~ 13427411 (-)
AMCG00020221 NA coding downstream 175169 13400114 ~ 13403240 (-)
AMCG00020216 whrn,dfnb31a,LOC107661489,LOC107692282 coding downstream 190412 13368648 ~ 13387997 (-)
AMCG00020215 NA coding downstream 226740 13344228 ~ 13351669 (-)
AMCG00020237 NA coding upstream 18916 13672295 ~ 13684406 (-)
AMCG00020236 NA coding upstream 37548 13690927 ~ 13702190 (-)
AMCG00020235 NA coding upstream 55437 13708816 ~ 13710669 (-)
AMCG00020240 NA coding upstream 58403 13711782 ~ 13715191 (-)
AMCG00020238 NA coding upstream 66051 13719430 ~ 13722948 (-)
G61729 NA non-coding downstream 128347 13447002 ~ 13450062 (-)
G61696 NA non-coding downstream 240308 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 570743 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 772976 12804670 ~ 12805433 (-)
G61550 NA non-coding downstream 834972 12719367 ~ 12743437 (-)
G61872 NA non-coding upstream 97705 13751084 ~ 13751298 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 136012 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 168369 13821748 ~ 13823540 (-)
G61943 NA non-coding upstream 259793 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 691918 14345297 ~ 14401302 (-)
AMCG00020212 NA other downstream 353897 13216996 ~ 13224512 (-)
G61589 NA other downstream 580186 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 1068472 12484369 ~ 12509937 (-)
AMCG00020159 NA other downstream 1526198 12001700 ~ 12052211 (-)
G61269 NA other downstream 1876764 11695691 ~ 11701645 (-)
AMCG00020229 NA other upstream 10697 13664076 ~ 13665592 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 151641 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 158034 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 171310 13824689 ~ 13834729 (-)
G62011 NA other upstream 476299 14129678 ~ 14131569 (-)

Expression


Co-expression Network