G61841


Basic Information

Item Value
gene id G61841
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13708835 ~ 13709496 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77411
ATAtccatacacacaaaacaaccaaaTACAACAGAAAGTGATCACTTTATTACAAACACTTGTAAACCCCTCAGCTGAAAAACCACAGCTGCCTAAAATGGAAAAGTGGCTGTATGGAGTGGATGGGGGGGCAAGGGGCAAGGGGCAAGGAGCAAGAAGGAGGAATTGGCAGTGCCCCCACCTACCCTTTGCTAGCTCATTGCAGCCGCACAGAGAAACATGCAGAATCGATGACCTCACTTTATGGCTGTGACATCACAAAGCCCTCCTCTGCCAGTGTTCTACAGCACACCTCACTACACTATTGATCCCTTCAATATTGACCatggaattaataataattctgatgCAAACAAAACTATTACTACTAGCTCTTATAAtcaattgttaaattaataaaatcaccccacattatatatacagatatctctctctctccctgcagtgtCTCTCCACTCTGTCACTGTGGCAGAGCCCCAGCCTCCCATCCCTGCACACCACATTAGTTACACAGGATCTGCAATCATTGGGCCAGCAAGGGCCTAAGGGAGTATAGAGAGTATTGTTAATCCATCGCATCGCCATAGCGCGTGGTCTTCGGCCCAGCTTCCACAGAGGGGGCGGCTGGGAGGGGCTCCTCT

Function

NR:

description
PREDICTED: probable voltage-dependent R-type calcium channel subunit alpha-1E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77411 True 641 lncRNA 0.47 2 13708835 13709496

Neighbor

gene id symbol gene type direction distance location
AMCG00020227 NA coding upstream 68907 13625863 ~ 13639928 (+)
AMCG00020228 NA coding upstream 95457 13597969 ~ 13613378 (+)
AMCG00020226 NA coding upstream 113384 13592096 ~ 13595451 (+)
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding upstream 122885 13583281 ~ 13585950 (+)
AMCG00020223 abca2 coding upstream 129660 13545411 ~ 13579175 (+)
AMCG00020232 NA coding downstream 23144 13732640 ~ 13736452 (+)
AMCG00020247 NA coding downstream 45439 13754935 ~ 13759675 (+)
AMCG00020242 ssna1,LOC107697981,LOC107684356,LOC107730341,LOC107559739 coding downstream 112265 13821761 ~ 13824208 (+)
AMCG00020243 alad,hem2,LOC106563307 coding downstream 130057 13839553 ~ 13846985 (+)
AMCG00020244 NA coding downstream 164285 13873781 ~ 13874299 (+)
G61774 NA non-coding upstream 112109 13595514 ~ 13596726 (+)
G61676 NA non-coding upstream 357301 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 359689 13348855 ~ 13349146 (+)
G61672 NA non-coding upstream 364796 13343757 ~ 13344039 (+)
G61671 NA non-coding upstream 365454 13343143 ~ 13343381 (+)
G61871 LOC100846954 non-coding downstream 41591 13751087 ~ 13751363 (+)
G61904 NA non-coding downstream 167815 13877311 ~ 13930740 (+)
G61895 NA non-coding downstream 178655 13888151 ~ 13890428 (+)
G62012 NA non-coding downstream 425802 14135298 ~ 14136287 (+)
G62013 NA non-coding downstream 426924 14136420 ~ 14136936 (+)
G61675 NA other upstream 358123 13349677 ~ 13350712 (+)
G61491 NA other upstream 1089018 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 1166574 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 1293884 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2408803 11274024 ~ 11300032 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 77518 13787014 ~ 13792944 (+)
G61894 NA other downstream 123674 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 153981 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 173329 13882825 ~ 13885116 (+)
AMCG00020267 NA other downstream 238930 13948426 ~ 13951047 (+)

Expression


Co-expression Network