G61871 (LOC100846954)


Basic Information

Item Value
gene id G61871
gene name LOC100846954
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13751087 ~ 13751363 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77450
cagcccagaactacacgggaggatcttgttaatgatctcaaggcagctgggaccatagtcaccaagaaaacaattggtaacacactacgccatgaaggactgaaatcctgcagtgcccgcaatgtccccctgctcaagaaagcacatgtacaggcccgtctgaagtttgccagtGAACATCTGAAtaattcagaggagaactgggtgaaagtgttgtggtcacaTGAGGccaaaatcaagctctttggcatcaactcaactcgccgtgtttggagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77450 True 277 lncRNA 0.49 1 13751087 13751363

Neighbor

gene id symbol gene type direction distance location
AMCG00020232 NA coding upstream 14635 13732640 ~ 13736452 (+)
AMCG00020227 NA coding upstream 111159 13625863 ~ 13639928 (+)
AMCG00020228 NA coding upstream 137709 13597969 ~ 13613378 (+)
AMCG00020226 NA coding upstream 155636 13592096 ~ 13595451 (+)
AMCG00020222 clic4,LOC107661585,LOC107595720,LOC108436785,LOC106563124,LOC107692326,LOC107736903 coding upstream 165137 13583281 ~ 13585950 (+)
AMCG00020247 NA coding downstream 3572 13754935 ~ 13759675 (+)
AMCG00020242 ssna1,LOC107697981,LOC107684356,LOC107730341,LOC107559739 coding downstream 70398 13821761 ~ 13824208 (+)
AMCG00020243 alad,hem2,LOC106563307 coding downstream 88190 13839553 ~ 13846985 (+)
AMCG00020244 NA coding downstream 122418 13873781 ~ 13874299 (+)
AMCG00020246 NA coding downstream 124278 13875641 ~ 13877226 (+)
G61841 NA non-coding upstream 41591 13708835 ~ 13709496 (+)
G61774 NA non-coding upstream 154361 13595514 ~ 13596726 (+)
G61676 NA non-coding upstream 399553 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 401941 13348855 ~ 13349146 (+)
G61672 NA non-coding upstream 407048 13343757 ~ 13344039 (+)
G61904 NA non-coding downstream 125948 13877311 ~ 13930740 (+)
G61895 NA non-coding downstream 136788 13888151 ~ 13890428 (+)
G62012 NA non-coding downstream 383935 14135298 ~ 14136287 (+)
G62013 NA non-coding downstream 385057 14136420 ~ 14136936 (+)
G62014 NA non-coding downstream 386063 14137426 ~ 14137829 (+)
G61675 NA other upstream 400375 13349677 ~ 13350712 (+)
G61491 NA other upstream 1131270 12615792 ~ 12619817 (+)
AMCG00020177 NA other upstream 1208826 12519764 ~ 12542261 (+)
AMCG00020171 rpl12 other upstream 1336136 12408962 ~ 12414951 (+)
AMCG00020143 pbx3,LOC107669256,LOC108434408 other upstream 2451055 11274024 ~ 11300032 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other downstream 35651 13787014 ~ 13792944 (+)
G61894 NA other downstream 81807 13833170 ~ 13834832 (+)
AMCG00020255 NA other downstream 112114 13863477 ~ 13872645 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other downstream 131462 13882825 ~ 13885116 (+)
AMCG00020267 NA other downstream 197063 13948426 ~ 13951047 (+)

Expression


Co-expression Network