G61872


Basic Information

Item Value
gene id G61872
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13751084 ~ 13751298 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77451
actttcacccagttctcctctgaattaTTCAGATGTTCactggcaaacttcagacgggcctgtacatgtgctttcttgagcagggggacattgcgggcactgcaggatttcagtccttcatggcgtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77451 True 215 lncRNA 0.48 1 13751084 13751298

Neighbor

gene id symbol gene type direction distance location
AMCG00020239 NA coding downstream 5651 13737734 ~ 13745433 (-)
AMCG00020233 NA coding downstream 20600 13723015 ~ 13730484 (-)
AMCG00020238 NA coding downstream 28136 13719430 ~ 13722948 (-)
AMCG00020240 NA coding downstream 35893 13711782 ~ 13715191 (-)
AMCG00020235 NA coding downstream 40415 13708816 ~ 13710669 (-)
AMCG00020234 NA coding upstream 9116 13760414 ~ 13767183 (-)
AMCG00020253 fbxw5,LOC107595987 coding upstream 41899 13793197 ~ 13797273 (-)
AMCG00020248 NA coding upstream 49295 13800593 ~ 13804321 (-)
AMCG00020250 NA coding upstream 62924 13814222 ~ 13820396 (-)
AMCG00020258 tmem203,LOC106566747 coding upstream 86504 13837802 ~ 13838218 (-)
G61803 NA non-coding downstream 97705 13578409 ~ 13653379 (-)
G61729 NA non-coding downstream 301022 13447002 ~ 13450062 (-)
G61696 NA non-coding downstream 412983 13337016 ~ 13338101 (-)
G61593 NA non-coding downstream 743418 13007422 ~ 13007666 (-)
G61558 NA non-coding downstream 945651 12804670 ~ 12805433 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding upstream 38093 13789391 ~ 13792931 (-)
G61927 NA non-coding upstream 70450 13821748 ~ 13823540 (-)
G61943 NA non-coding upstream 161874 13913172 ~ 13914166 (-)
G62066 NA non-coding upstream 593999 14345297 ~ 14401302 (-)
G62143 NA non-coding upstream 952213 14703511 ~ 14767563 (-)
AMCG00020229 NA other downstream 85492 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 154167 13595518 ~ 13596917 (-)
AMCG00020212 NA other downstream 526572 13216996 ~ 13224512 (-)
G61589 NA other downstream 752861 12997838 ~ 12998223 (-)
AMCG00020180 tubb2b,tubb4b,tbb2c,LOC103372938,LOC106580001,LOC100136483,LOC105029894,LOC103045037,LOC105891054,LOC105023713,LOC106593669,LOC108260450,LOC108241762,LOC106575097 other downstream 1241147 12484369 ~ 12509937 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other upstream 53722 13805020 ~ 13808333 (-)
AMCG00020256 NA other upstream 60115 13811413 ~ 13813003 (-)
AMCG00020249 NA other upstream 73391 13824689 ~ 13834729 (-)
G62011 NA other upstream 378380 14129678 ~ 14131569 (-)
G62061 NA other upstream 579224 14330522 ~ 14332407 (-)

Expression


Co-expression Network