G61904


Basic Information

Item Value
gene id G61904
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 13877311 ~ 13930740 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77505
cacacacacgcaaaaaaTCTGGATTcatttgtaaaaatgaaaaatcagaGAATATACTTTATTTGACAAAGTATCACCCAGGACACGTCTCACTATCGACACGAATCCGTGCTTCTCACACGGCATGTTCTTTCTGAGAATTTTGtataccttttatttattttttttaatgacctgaaataaaataaaaataaaaacctttgacaAATGTGCAGCTGGTCTGGTGCAAGTCCAGTGTGGGTCCTAAGTGGCACAACAGGATGGCCGTCTCAGCCAGTCAGGGAAACTGCACTGGCCGCCAGAAATTCAGCTGAAATTCCACATCTCCACAGGAGGGTGCTGTTGCATCACTAATTACTCTGGTCCATTTACAGGCTTCTGTAGCTCTTGACTGTGTCTGGTGAATTAATGACTAATACAGAGGGTGGCGTTCGGGGGAGTTGTTGGCCTTgtcctagagagagagagattcccCAGCAGGATCCCTAGGGCACcacaaatctgttttaaaaagacTAGGACCAAATGCCTTGTGATCAGTTCAGTAATTAACGCTTTAAAAATTCTGCAATTTAGAGACAAGGGAGAGACTGTGGTTGCACGGCGAATAGGTAGTGCAGCCGGGACTGTAAGAGTCTGTTCGTGGTTGTGGGGGTGTGTGGTGGTCACGGGGGAGGGGGTCACACCCCCTTACTCGGACATCCACAGCTTGAAGGTGCGGTCGTAGGAGCAGGTGGCAATGAGCTGGCCATCTGGTGCCACATCCAGCCCCATCACCTTGCCCTCGTGTCCTGCCAGCGTCTTCAGTGGTGACCAGCCCGGGTGAGGGGGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77505 True 835 lncRNA 0.48 2 13877311 13930740

Neighbor

gene id symbol gene type direction distance location
AMCG00020246 NA coding upstream 85 13875641 ~ 13877226 (+)
AMCG00020244 NA coding upstream 3012 13873781 ~ 13874299 (+)
AMCG00020243 alad,hem2,LOC106563307 coding upstream 30326 13839553 ~ 13846985 (+)
AMCG00020242 ssna1,LOC107697981,LOC107684356,LOC107730341,LOC107559739 coding upstream 53103 13821761 ~ 13824208 (+)
AMCG00020247 NA coding upstream 117636 13754935 ~ 13759675 (+)
AMCG00020265 fhod1 coding downstream 23747 13954487 ~ 13956067 (+)
AMCG00020262 LOC108432357 coding downstream 42674 13973414 ~ 13975559 (+)
AMCG00020264 fhod1,LOC107740454,LOC106562854,LOC107553095 coding downstream 57340 13988080 ~ 13995139 (+)
AMCG00020263 NA coding downstream 69487 14000227 ~ 14022327 (+)
AMCG00020266 NA coding downstream 121618 14052358 ~ 14055730 (+)
G61871 LOC100846954 non-coding upstream 125948 13751087 ~ 13751363 (+)
G61841 NA non-coding upstream 167815 13708835 ~ 13709496 (+)
G61774 NA non-coding upstream 280585 13595514 ~ 13596726 (+)
G61676 NA non-coding upstream 525777 13351248 ~ 13351534 (+)
G61674 NA non-coding upstream 528165 13348855 ~ 13349146 (+)
G62012 NA non-coding downstream 204558 14135298 ~ 14136287 (+)
G62013 NA non-coding downstream 205680 14136420 ~ 14136936 (+)
G62014 NA non-coding downstream 206686 14137426 ~ 14137829 (+)
G62039 NA non-coding downstream 311125 14241865 ~ 14288834 (+)
G62062 NA non-coding downstream 414556 14345296 ~ 14401302 (+)
AMCG00020255 NA other upstream 4666 13863477 ~ 13872645 (+)
G61894 NA other upstream 42479 13833170 ~ 13834832 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other upstream 84367 13787014 ~ 13792944 (+)
G61675 NA other upstream 526599 13349677 ~ 13350712 (+)
G61491 NA other upstream 1257494 12615792 ~ 12619817 (+)
AMCG00020267 NA other downstream 17686 13948426 ~ 13951047 (+)
AMCG00020273 NA other downstream 265044 14195784 ~ 14232268 (+)
AMCG00020281 slc12a4 other downstream 537060 14467800 ~ 14472545 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 2652146 16582886 ~ 16604658 (+)
G62632 NA other downstream 2883634 16814374 ~ 16815857 (+)

Expression


Co-expression Network