G62011


Basic Information

Item Value
gene id G62011
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14129678 ~ 14131569 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77648
CTCGTTGCTAATGGGAATATTTACAACGCAACACGCACCGGCCTGTTTGAAAGTATGGCGGCGGAGGAGATGGTCGGGCAGACCTGGGTGATTGATAAAGTAGGGCTGCCCAACCGGACGAGCTTAGAAGCAGTGGAGACCCTGTCACTGCAAGGGAGCTGCAGCCAGAAGATCCTGGGCTTCAGAGAAGCTTTCATCACCTGCAGAAGCCTGCGCTGCCTGGACCTCTCCCGCAACGCCATCGTGAGCCTGGAGGCAAGCAGCCGCCGCAGCCGCCGCAGCCGCCTGGGTCCACTGAAACGCTGCAGCAGTGAAGGGTCATTCCATGAAATTAGGATGTCTGTGATCAAATACGAATTACAAATGACTTTTtgtattatggttattattaatgttcttgccaaatttgttttttctttcttaatgttACTTCAAAGCTGTGTTCAATAATGCATGTTTGCTTGTCTATTCCTTATTTGACTAGTAGTTACATGCAGGTCATTTGACTGTCCTGTACAACATATTACAGTTCTCTTAATggtaatgaataaaacaatcaatttcTACCCCCTACTTTGTCTAAATGTAGGTGCTAGACCGTCTTCACAGTGGCAGTGATACTATACAGATTACTATGATTATTTAAGTTGCAAAGAGAAGGAAATCACTACTGGGGTCCCATACAACACACTTGCTATCACCTGAAAGAGCTTTTTGAGTTGAACTGGGGTCTGTGTGTTAATGCTTACCGATTGGCTATGCACAACTTCGTGGCGAGaaggtgctgctgctgctgccaccatCCACAGACCACCTGTAAAGCTCTGACGATCTGTGACTTCAAAAGGATGTTGACAAAAGCTTCAAGGTTTGCAGGAAAACTGGCTCTGCAGCCCTGTTACATCACTCTTGGCACATCTCACCATTGAAAAGacacattattaaatattcagGATTTGGATAGGTTGCTGCTCTCATGTCACACAGGTGCTCCTGTCCTACCTGTCACATATTCACTGATTGacaggatttattttacagtcCATTTAGATCACGATCtatgctatattattatttataggctcCTGATTTATGGAGTTACATTACAGGTTTCTTCAATCCT

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU77648 True 1123 TUCP 0.44 2 14129678 14131569

Neighbor

gene id symbol gene type direction distance location
AMCG00020261 slc31a1 coding downstream 239147 13886384 ~ 13890531 (-)
AMCG00020251 prpf4,LOC107721635,LOC107743802,LOC107663789,LOC107691731 coding downstream 247489 13877282 ~ 13882189 (-)
AMCG00020254 NA coding downstream 277209 13850330 ~ 13852469 (-)
AMCG00020257 NA coding downstream 280594 13848344 ~ 13849084 (-)
AMCG00020258 tmem203,LOC106566747 coding downstream 291460 13837802 ~ 13838218 (-)
AMCG00020270 tppp3,LOC106588035 coding upstream 6843 14138412 ~ 14145684 (-)
AMCG00020269 NA coding upstream 17005 14148574 ~ 14169641 (-)
AMCG00020274 atp6v0d1,LOC106588021,LOC103462946 coding upstream 110296 14241865 ~ 14249749 (-)
AMCG00020278 NA coding upstream 180843 14312412 ~ 14314001 (-)
AMCG00020282 NA coding upstream 274214 14405783 ~ 14427264 (-)
G61943 NA non-coding downstream 215512 13913172 ~ 13914166 (-)
G61927 NA non-coding downstream 306138 13821748 ~ 13823540 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding downstream 336747 13789391 ~ 13792931 (-)
G61872 NA non-coding downstream 378380 13751084 ~ 13751298 (-)
G61803 NA non-coding downstream 476299 13578409 ~ 13653379 (-)
G62066 NA non-coding upstream 213728 14345297 ~ 14401302 (-)
G62143 NA non-coding upstream 571942 14703511 ~ 14767563 (-)
G62191 NA non-coding upstream 900566 15032135 ~ 15034076 (-)
G62283 LOC107575789 non-coding upstream 1291586 15423155 ~ 15423574 (-)
G62475 NA non-coding upstream 2348961 16480530 ~ 16480990 (-)
AMCG00020249 NA other downstream 294949 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 316675 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 321345 13805020 ~ 13808333 (-)
AMCG00020229 NA other downstream 464086 13664076 ~ 13665592 (-)
AMCG00020230 NA other downstream 532761 13595518 ~ 13596917 (-)
G62061 NA other upstream 198953 14330522 ~ 14332407 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 1967331 16098900 ~ 16102739 (-)
G62409 NA other upstream 1987420 16118989 ~ 16120153 (-)
G62415 NA other upstream 2121219 16252788 ~ 16255119 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 2140882 16272451 ~ 16275573 (-)

Expression


Co-expression Network