G62012


Basic Information

Item Value
gene id G62012
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14135298 ~ 14136287 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77649
TAAAGATGTATGGTACATTAGGCCCCATTCCATGTTGCACTGTTTCAATTATGCATTACTGTAAGAGCCCAGTTCATTTACTGAAAACAGTTCAgagacagatataattgtgaaGCGGTTTAACTCATTGTtctaagaaaaacaacagttaTACAAAATGGAGGAAATTAGAAAAAGCTGCACAAAGTTAAAAGCTGCAATTATCTTTCTGGGATTGGAGAAGCAATTACTTAGAAAAGCATGACTATacttaattgcaaaataaaattaagacattaatccccccccccaagttATATCCAAAGTTATATCTGGATAACTTTTCCATTATGCCATCTGATATAAATCTGTAATCTGAAAAGGCCTAGCCACTAGACAGCAGATAATGTGGTTGGAAAAGTGTTGAGAATCAATATCAGACACAAACTAATGCAGCACATGGGATGTCACTGCCCTAATGGCTGTGCTCAGCCTGATTGTGCTTGTTGGCTGGGTCTAATActccttttccactggcatatcaGAACTGACTTGGAACCACAATGGTGTGGTGCAGCATGTTACCCAATGACGATTTTGTAGAGCCGACACTGCTGAAACAGGACATGGATTTTGGGCTCTGCTCCTTACCTAGTGCTGGCCCGGAGCCGACCTATTACtaggttaaaatacatttcaaatacttaatacattaataaaatacattacaaatacttaacaAACCGCTACTGCTTAATAAATactggtaaaaacaaaaaaaaagtaggatttATCTACACAATTAATGTAGCCCTTCTTCATCTGTAACCTTTAACATCCAACGTCCAGAAACTTTTTTTAAGACTCATTCTCTCGCCTCTCTCAATAgataagtttatttatttataacagtaaaagctgatagtttttttaatacaaattaaaccatgGTAACAAGGATTAATCCAAACATTTGTTGCATGTTGCAACATAGCTTTTGAAATAGGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77649 True 990 lncRNA 0.36 1 14135298 14136287

Neighbor

gene id symbol gene type direction distance location
AMCG00020268 LOC106594058 coding upstream 36649 14085133 ~ 14098649 (+)
AMCG00020266 NA coding upstream 79568 14052358 ~ 14055730 (+)
AMCG00020263 NA coding upstream 112971 14000227 ~ 14022327 (+)
AMCG00020264 fhod1,LOC107740454,LOC106562854,LOC107553095 coding upstream 140159 13988080 ~ 13995139 (+)
AMCG00020262 LOC108432357 coding upstream 159739 13973414 ~ 13975559 (+)
AMCG00020271 NA coding downstream 121285 14257572 ~ 14259160 (+)
AMCG00020272 LOC108432371 coding downstream 125695 14261982 ~ 14272204 (+)
AMCG00020277 LOC102693979 coding downstream 158446 14294733 ~ 14302999 (+)
AMCG00020275 dus2,LOC108229071,LOC106942792 coding downstream 178105 14314392 ~ 14332409 (+)
AMCG00020276 NA coding downstream 203548 14339835 ~ 14383230 (+)
G61904 NA non-coding upstream 204558 13877311 ~ 13930740 (+)
G61895 NA non-coding upstream 244870 13888151 ~ 13890428 (+)
G61871 LOC100846954 non-coding upstream 383935 13751087 ~ 13751363 (+)
G61841 NA non-coding upstream 425802 13708835 ~ 13709496 (+)
G61774 NA non-coding upstream 538572 13595514 ~ 13596726 (+)
G62013 NA non-coding downstream 133 14136420 ~ 14136936 (+)
G62014 NA non-coding downstream 1139 14137426 ~ 14137829 (+)
G62039 NA non-coding downstream 105578 14241865 ~ 14288834 (+)
G62062 NA non-coding downstream 209009 14345296 ~ 14401302 (+)
G62108 NA non-coding downstream 418569 14554856 ~ 14621700 (+)
AMCG00020267 NA other upstream 184251 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 250182 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 262653 13863477 ~ 13872645 (+)
G61894 NA other upstream 300466 13833170 ~ 13834832 (+)
AMCG00020245 LOC107746475,LOC107567702,LOC107595988 other upstream 342354 13787014 ~ 13792944 (+)
AMCG00020273 NA other downstream 59497 14195784 ~ 14232268 (+)
AMCG00020281 slc12a4 other downstream 331513 14467800 ~ 14472545 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 2446599 16582886 ~ 16604658 (+)
G62632 NA other downstream 2678087 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 3297355 17433642 ~ 17442711 (+)

Expression


Co-expression Network