G62066


Basic Information

Item Value
gene id G62066
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14345297 ~ 14401302 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77716
tatttctgcattttcagttttattttacactacCAATTAAGAGCCTAAAATGCAAGGGATTCCCTTTGAATATCTCCAAAAGCACTGCAAtcttaaaaattacaaaatgttaaaatacaaaatgtacatgaaATTACAATACAAGGCTCTGTAAACATCAGCTAAAGAATTTACCTGTATTTCCcttcttttaatttacaaaacctTTTTGTTTATCTCTTATATTTTCCCCCCCAACCTTTAGGAATGACATCCACCATAGAGTATCAAAAATAGAGTCTCAAAGCAAGTGATTTACCAGGAAGTAAAAcgtgtacattttacatttttctttcttttatctttGGTAGTAAAGGCCGGGCGCTGCGGTGCCGGGCGCAGGGGAGCGCGTGTTGTGGCTCTTGCCCGTGTTTAGAGGTGCAGAACTAGCATTTCAAACCACACAGCTTCCATCCTTTTCTTCTCTaacttgtgttttatgtttactttcctaaaacaatgcaaaactgCTTATATACCATTTATTCAGTAATTAGAAGTTTTAAAACTTTACAATTGTTAAGGCtttcctacattttttttaaattatatatatatatatatatatatattttttt
>TU77717
tatttctgcattttcagttttattttacactacCAATTAAGAGCCTAAAATGCAAGGGATTCCCTTTGAATATCTCCAAAAGCACTGCAAtcttaaaaattacaaaatgttaaaatacaaaatgtacatgaaATTACAATACAAGGCTCTGTAAACATCAGCTAAAGAATTTACCTGTATTTCCcttcttttaatttacaaaacctTTTTGTTTATCTCTTATATTTTCCCCCCCAACCTTTAGGAATGACATCCACCATAGAGTATCAAAAATAGAGTCTCAAAGCAAGTGATTTACCAGGAAGTAAAAcgtgtacattttacatttttctttcttttatctttGGTAGTAAAGGCCGGGCGCTGCGGTGCCGGGCGCAGGGGAGCGCGTGTTGTGGCTCTTGCCCGTGTTTAGAGGTGCAGAACTAGCATTTCAAACCACACAGCTTCCATCCTTTTCTTCTCTaacttgtgttttatgtttactttcctaaaacaatgcaaaactgCTTATATACCATTTATTCAGTAATTAGAAGTTTTAAAACTTTACAATTGTTAAGGCtttcctacattttttttaaattatatatataattttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77716 True 617 lncRNA 0.33 2 14353490 14401302
TU77717 False 614 lncRNA 0.33 2 14345297 14401302

Neighbor

gene id symbol gene type direction distance location
AMCG00020278 NA coding downstream 31296 14312412 ~ 14314001 (-)
AMCG00020274 atp6v0d1,LOC106588021,LOC103462946 coding downstream 95548 14241865 ~ 14249749 (-)
AMCG00020269 NA coding downstream 175656 14148574 ~ 14169641 (-)
AMCG00020270 tppp3,LOC106588035 coding downstream 199613 14138412 ~ 14145684 (-)
AMCG00020261 slc31a1 coding downstream 454766 13886384 ~ 13890531 (-)
AMCG00020282 NA coding upstream 4481 14405783 ~ 14427264 (-)
AMCG00020283 NA coding upstream 35494 14436796 ~ 14437815 (-)
AMCG00020284 NA coding upstream 38229 14439531 ~ 14440544 (-)
AMCG00020285 slc12a4,LOC107696691,LOC107548948,LOC107563468,LOC107740471,LOC107657107 coding upstream 61111 14462413 ~ 14484977 (-)
AMCG00020288 slc6a2,LOC103378986 coding upstream 95932 14497234 ~ 14545943 (-)
G61943 NA non-coding downstream 431131 13913172 ~ 13914166 (-)
G61927 NA non-coding downstream 521757 13821748 ~ 13823540 (-)
G61920 LOC107746475,LOC107567702,LOC107595988,LOC107697985 non-coding downstream 552366 13789391 ~ 13792931 (-)
G61872 NA non-coding downstream 593999 13751084 ~ 13751298 (-)
G61803 NA non-coding downstream 691918 13578409 ~ 13653379 (-)
G62143 NA non-coding upstream 302209 14703511 ~ 14767563 (-)
G62191 NA non-coding upstream 630833 15032135 ~ 15034076 (-)
G62283 LOC107575789 non-coding upstream 1021853 15423155 ~ 15423574 (-)
G62475 NA non-coding upstream 2079228 16480530 ~ 16480990 (-)
G62580 NA non-coding upstream 2267595 16668897 ~ 16669511 (-)
G62061 NA other downstream 12890 14330522 ~ 14332407 (-)
G62011 NA other downstream 213728 14129678 ~ 14131569 (-)
AMCG00020249 NA other downstream 510568 13824689 ~ 13834729 (-)
AMCG00020256 NA other downstream 532294 13811413 ~ 13813003 (-)
AMCG00020252 atp6v1g1,LOC107566902,LOC108259956 other downstream 536964 13805020 ~ 13808333 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other upstream 1697598 16098900 ~ 16102739 (-)
G62409 NA other upstream 1717687 16118989 ~ 16120153 (-)
G62415 NA other upstream 1851486 16252788 ~ 16255119 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 1871149 16272451 ~ 16275573 (-)
AMCG00020336 NA other upstream 2215021 16616323 ~ 16624970 (-)

Expression


Co-expression Network