G62185


Basic Information

Item Value
gene id G62185
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 15032042 ~ 15034083 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU77862
ctaaaactgtaaaaaaaataagaaaaaacacaaactggaaATGACAGCAGAGATTTggctttattataataattttaaatgatgatCATGATGTTGACAGTATTGGTTTCATAAACATTCAGCTAAAATCCCACCACTCCTTGATTCATAAtgtttacaaattacataaaaaaaaaaaaaacagcaatacaaaaaaatacattcattaaaaaaaatcacaaatgccTCAAGTACAACACCAAAAAACACAGTTGAAAAGCCattcaaaatgacaaaacagatGTAATTATGAAAAGCATGTGTTCTGCATTGGATTTCGTCTACACTGTGGAGATAAGGTTGACTCTTATCACTGTTACACACTGGAAAGAGGTTGCAAGTTTCCCCCGCGAGCACAAACACCTCCCCACATCACCGCTGGCTCATACTCCTGAACACATGCAAGGCGGTGATAGCCACCTAACAGCACAGAAATTAGGGCATtaatcactaaataaataaatgaagcaaaGACCGCAGCCCACAGGTGATAGTTGCACTCCAGAAAGAACGCTCCTCCACATCATGAAAAGCACAGCCTTCTCTGATTAACCTGCTCAGCATGTATGGTTCCCAGCATTGTCTGTCTGAAATTAAACTTTACAAATACATGACATGTCCACACCAACCCAGAATCCACCTCGGCTATGGATCATCTTCTGatttagcttttaaaaacatCCCTTCCATATGAACATAGAATGCAATGAGTCGTTTTATCGTATAGACTGAGAACACTGTGGTATCAAAACTCTGATCGGCCACAGAAAACACTTGATTAAAAATACCTTAGATTTAACGAAGTAGAATTAAAAGTACAACAATGTTTAAAAGGTTGATTATGCTTGCATCACGAGGATTAACCAATGGATAGAACATGACATGGATTTTACGACATTGTGAAGTAATCGTGCCAGGTGACCgtgggttttattttcatgatttcatCTGAAggggataaaacaaacaaacaatgcacTACTTGTACCGCCATTCGTTACTCAACTGCTTATCCACAAACTAAACTCGCAGATCTGGCTCAaggtaaaaaaattaaataaagaagtgctgtgtttgtgttggccTCCATCGCCACAGCCGTGTCCCCGTTGATGGATACTGTCTAAAGGCAAGTGGCGACAGACGATCAGATCCCTATCTTCAGTAATCCATTTAGGCTGACACACGTGCTGCAGGAAACTATTTCACAGCCATTCTTCAAAgcctgatgaaaacaaaatatacacaaagtCACCACCTTCTTCAATTTGAAACTAATCAGAGTTTGCTTAGTATTGCCAAGTAATTTATGCCTGCGCTGCGAGAGGAGAACCTGACCTAGGGTCTCCCTGCACTtagaggcagaggaggaagagcacagagagagagagaacatccATTAcgacaaatgaaaaaaaaaaagagtgcagAAAGATGGTGTTTGTACAGAGGCCAAACTCTAACGGCTCTGATAATTAAACCATATTTATGTGCAAGGGAAAGAACTATTGACCAGACAGACACCATTTATCAAAACTGGGGATCATAAAAATATAGAGGTCTCTGTGCTCAGACATTTGGCCAGCTGTCCAAGTTCTCTTCTCGGGGGCTTGGCAGCGGACAGCCGTGATGTAGGAACTCAAGAGCGGCCACAAATTCCCACACATCAGCAAGACCCCTGGGTCTCACAGAAGACTCTCCAGAGTTTGTATGATGGTCTTCAGGTCAAAAGGAAGAGGCAGAGAAGGGTCATGGTCACGCCAGTAAGGGTGAAACATGGGAGCTTCGTCAGCGGGCAACGTCTGGGCAAGTCTGGACTGGCACCTAGAGAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77862 True 1874 lncRNA 0.41 2 15032042 15034083

Neighbor

gene id symbol gene type direction distance location
AMCG00020291 NA coding upstream 40591 14990708 ~ 14991451 (+)
AMCG00020292 NA coding upstream 41612 14989030 ~ 14990430 (+)
AMCG00020280 NA coding upstream 570741 14451775 ~ 14461301 (+)
AMCG00020279 amfr,LOC107566269 coding upstream 581391 14439078 ~ 14450651 (+)
AMCG00020276 NA coding upstream 648812 14339835 ~ 14383230 (+)
AMCG00020298 NA coding downstream 126514 15160597 ~ 15165994 (+)
AMCG00020296 NA coding downstream 131931 15166014 ~ 15199292 (+)
AMCG00020295 NA coding downstream 178007 15212090 ~ 15218030 (+)
AMCG00020297 aktip,LOC107713059 coding downstream 201600 15235683 ~ 15244984 (+)
AMCG00020299 NA coding downstream 210939 15245022 ~ 15247620 (+)
G62108 NA non-coding upstream 410342 14554856 ~ 14621700 (+)
G62118 NA non-coding upstream 453340 14577507 ~ 14578702 (+)
G62114 NA non-coding upstream 464604 14566719 ~ 14567438 (+)
G62062 NA non-coding upstream 630740 14345296 ~ 14401302 (+)
G62039 NA non-coding upstream 743208 14241865 ~ 14288834 (+)
G62251 chd9,LOC106562403 non-coding downstream 263664 15297747 ~ 15298181 (+)
G62275 NA non-coding downstream 299601 15333684 ~ 15335056 (+)
G62282 LOC107575789 non-coding downstream 389124 15423207 ~ 15423573 (+)
G62368 NA non-coding downstream 1030012 16064095 ~ 16066816 (+)
G62398 NA non-coding downstream 1064903 16098986 ~ 16100810 (+)
AMCG00020281 slc12a4 other upstream 559497 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 799774 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 1080995 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 1146926 13882825 ~ 13885116 (+)
AMCG00020255 NA other upstream 1159397 13863477 ~ 13872645 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other downstream 1548803 16582886 ~ 16604658 (+)
G62632 NA other downstream 1780291 16814374 ~ 16815857 (+)
AMCG00020370 NA other downstream 2399559 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 2425061 17459144 ~ 17471869 (+)
G62895 NA other downstream 2894245 17928328 ~ 17928904 (+)

Expression


Co-expression Network