Gene
RNA
| Item | Value |
|---|---|
| gene id | G62283 |
| gene name | LOC107575789 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 15423155 ~ 15423574 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU77990 | True | 420 | lncRNA | 0.47 | 1 | 15423155 | 15423574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020303 | NA | coding | downstream | 102879 | 15308859 ~ 15320276 (-) |
| AMCG00020301 | chd9 | coding | downstream | 115659 | 15270793 ~ 15307496 (-) |
| AMCG00020302 | NA | coding | downstream | 153729 | 15269069 ~ 15269426 (-) |
| AMCG00020300 | NA | coding | downstream | 157393 | 15246273 ~ 15265762 (-) |
| AMCG00020293 | NA | coding | downstream | 278072 | 15130659 ~ 15145083 (-) |
| AMCG00020310 | NA | coding | upstream | 444932 | 15868506 ~ 15892048 (-) |
| AMCG00020308 | NA | coding | upstream | 469653 | 15893227 ~ 15901574 (-) |
| AMCG00020309 | NA | coding | upstream | 498719 | 15922293 ~ 15933678 (-) |
| AMCG00020312 | NA | coding | upstream | 588491 | 16012065 ~ 16036730 (-) |
| AMCG00020313 | papd5 | coding | upstream | 643839 | 16067413 ~ 16078705 (-) |
| G62191 | NA | non-coding | downstream | 389079 | 15032135 ~ 15034076 (-) |
| G62143 | NA | non-coding | downstream | 655592 | 14703511 ~ 14767563 (-) |
| G62066 | NA | non-coding | downstream | 1021853 | 14345297 ~ 14401302 (-) |
| G61943 | NA | non-coding | downstream | 1508989 | 13913172 ~ 13914166 (-) |
| G61927 | NA | non-coding | downstream | 1599615 | 13821748 ~ 13823540 (-) |
| G62475 | NA | non-coding | upstream | 1056956 | 16480530 ~ 16480990 (-) |
| G62580 | NA | non-coding | upstream | 1245323 | 16668897 ~ 16669511 (-) |
| G62582 | NA | non-coding | upstream | 1256282 | 16679856 ~ 16680624 (-) |
| G62655 | gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 | non-coding | upstream | 1473296 | 16896870 ~ 16923733 (-) |
| G62659 | NA | non-coding | upstream | 1563745 | 16987319 ~ 16989284 (-) |
| G62061 | NA | other | downstream | 1090748 | 14330522 ~ 14332407 (-) |
| G62011 | NA | other | downstream | 1291586 | 14129678 ~ 14131569 (-) |
| AMCG00020249 | NA | other | downstream | 1588426 | 13824689 ~ 13834729 (-) |
| AMCG00020256 | NA | other | downstream | 1610152 | 13811413 ~ 13813003 (-) |
| AMCG00020252 | atp6v1g1,LOC107566902,LOC108259956 | other | downstream | 1614822 | 13805020 ~ 13808333 (-) |
| AMCG00020316 | cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 | other | upstream | 675326 | 16098900 ~ 16102739 (-) |
| G62409 | NA | other | upstream | 695415 | 16118989 ~ 16120153 (-) |
| G62415 | NA | other | upstream | 829214 | 16252788 ~ 16255119 (-) |
| G62421 | LOC103138816,LOC103466733,LOC108251456 | other | upstream | 848877 | 16272451 ~ 16275573 (-) |
| AMCG00020336 | NA | other | upstream | 1192749 | 16616323 ~ 16624970 (-) |
