G62415


Basic Information

Item Value
gene id G62415
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16252788 ~ 16255119 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78153
CTGCCTGGCCCCGGCGTGCTGCGGCCCCCACCGCGGGGCCCTGCTGCTCTGCGCGGCCGGGCCGTGCTGGTTGCCGTTGGGGTCCTCCTCCGCCATGGAGCcgcgctggatctccgcctccgACAGCAGCGCCGCCGCCATGCCCGAGCCCGCACTCCCGCCCTCAGCTGCAGGGCACACAAAGCGCGGACGGTTACGATGGTCGTTATTACCGTTTGTCGCACAGCTCTGCCCTGACACAGCGCCAGGGATGCGGATCCTCCAGCGCCACAGAGCCCGGCACCCGGAAATACACTGCGCACCGCCCGGACCTCCGACGCCTGTGCTCGGCGGAGTTATACTGTATAAAAGCACACGGGGCCGGCCCGCCGGGGGTCGTCGTGCCCTCAGTGGCCCTGCCGGCCGCGCAGGTAGTCTGAGCCGGGCCGTCCGCGCCTCCCGGAGCCCAAACTTTCTGCCACCGGCGCCTGGCAGCTGATGCGCGGCGCAGGGACGGTCTGCAGCTTCTGCCGTGTTTGGGATCCCGTTCCGCTGCAGGACTGAGCGCACAAACTGCGGCTTAAACCCCGTGTCTGCCCCGAACCAAACCAGAGGATCTGGGTGGAAATGAAGTCATTTACCTTCCATCTGTACGCGTGTGCTGTGCGGCTCTCGACACCGGCGAACAGGGTTTGTCAAATGCAGAGGATCCCCGGGCTGCTGTGCTGGGAGGTGACGTCGCCGCGGTCAAGTCACTTCACTGATCCGGCTTCCTGCTGCCCgagcctggagagagagagggagacgggcCGCCGcttcggctcggctcggctcggctcggctcggctcgttAGATACCCGGTTGCAGGTCGTGCTGGTCCGGGTTAGTTTCTGTGACTCGGGCGGGACATGCAATCCTCACAGTGTTAGAGAAACAACTCGAGAGTAGGGGTTTGAATTGTCTTCACCAAGGCACAGCCAcactatctatctctctctctctctctatatatatatatatatatatatatgacacacacTACAAGATTTACatctatacacatacacaacaccaacactacacacacacccctacattacacacacaccttcacaACACATACTAAcactagacacacacacacacccaccacattacacacattaaacCAAACTGCCAGTGAGTGAGTGCGCTGGTCCTGCCCTTCAGAGTGTCAGTCTGGTAGgaattatacattgatttaatattgtattgttcatGTGTAACTATTGCACAGTTCTGTAGCACACCTGAAATTACACCATTTGCATTGGTTAGTTTTAACTGGGGTCAGGTAGACTGAGGTAATACAACGCACATAGGCTAGGGTCTCCCCTCATCAGTGCACTGCAGCGTCATAGATCAGCATAAGGATGCGGAATAGTATCCAGGTGTTGGGCTAATTCAttgtaaaatctgtattttctgAAGATTTGGTCaattaacaaaaatagaaaatcaaaTATGATAATATAAGTGGTAGGTATGATGTAATGGatactgtttgttattttgataaatacaacacaactatgcaatacagtttaaataaatgatcaaattgGGGTTCCATTGTGGTTGGGTAGGAGTTCACAGTAAACTTAGGCCTTCATTTAagacagtggttcccaGGTccggtttgggaacctctgatTTAAGATGTGGCTGTGTTCCCACTTTGATAAGTGAACCGTGTGTAGATTTGTTTGCTGAGCTTGAACTTGTTTTGCcagggttggggttcaggctgctgtGTGGCCTGATTTCATACTGTATTGTGTATTGCGTTAGTTCAGAATAAGAATACTCATTATTACTTATTTGTGTGGCTAAtttaacagatgtatttatgtatttatttataaatgttctgCGTTTCATAGTTTTAAACGTAACAGGCATGTGCCCGTCTGCTGCCATCTACTGGCCCAATAATGTGTTGAACTACTGGGACTTTAATTGAACTGGTCGACAGCGTGTGGTTGAAAAGGCATCGATGTGAATTCTCTCTCAATAAAACAGAGCTGTAGTTGTAGTGGTGTGA

Function

NR:

description
LOW QUALITY PROTEIN: cadherin-23-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78153 True 2063 TUCP 0.51 2 16252788 16255119

Neighbor

gene id symbol gene type direction distance location
AMCG00020317 NA coding downstream 155235 16088956 ~ 16097553 (-)
AMCG00020313 papd5 coding downstream 174083 16067413 ~ 16078705 (-)
AMCG00020312 NA coding downstream 216058 16012065 ~ 16036730 (-)
AMCG00020309 NA coding downstream 319110 15922293 ~ 15933678 (-)
AMCG00020308 NA coding downstream 351214 15893227 ~ 15901574 (-)
AMCG00020323 LOC107577405,LOC104961177 coding upstream 202460 16457579 ~ 16469287 (-)
AMCG00020325 lonp2 coding upstream 217465 16472584 ~ 16473662 (-)
AMCG00020324 NA coding upstream 219154 16474273 ~ 16479633 (-)
AMCG00020328 sf3b3 coding upstream 279577 16534696 ~ 16548548 (-)
AMCG00020329 NA coding upstream 303423 16558542 ~ 16569600 (-)
G62283 LOC107575789 non-coding downstream 829214 15423155 ~ 15423574 (-)
G62191 NA non-coding downstream 1218712 15032135 ~ 15034076 (-)
G62143 NA non-coding downstream 1485225 14703511 ~ 14767563 (-)
G62066 NA non-coding downstream 1851486 14345297 ~ 14401302 (-)
G61943 NA non-coding downstream 2338622 13913172 ~ 13914166 (-)
G62475 NA non-coding upstream 225411 16480530 ~ 16480990 (-)
G62580 NA non-coding upstream 413778 16668897 ~ 16669511 (-)
G62582 NA non-coding upstream 424737 16679856 ~ 16680624 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding upstream 641751 16896870 ~ 16923733 (-)
G62659 NA non-coding upstream 732200 16987319 ~ 16989284 (-)
G62409 NA other downstream 132635 16118989 ~ 16120153 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other downstream 150049 16098900 ~ 16102739 (-)
G62061 NA other downstream 1920381 14330522 ~ 14332407 (-)
G62011 NA other downstream 2121219 14129678 ~ 14131569 (-)
AMCG00020249 NA other downstream 2418059 13824689 ~ 13834729 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other upstream 17332 16272451 ~ 16275573 (-)
AMCG00020336 NA other upstream 361204 16616323 ~ 16624970 (-)
G62618 NA other upstream 537747 16792866 ~ 16793167 (-)
AMCG00020346 nup93,LOC103368977 other upstream 539877 16794996 ~ 16817767 (-)
G62853 necab2 other upstream 1355545 17610664 ~ 17626189 (-)

Expression


Co-expression Network