G62582


Basic Information

Item Value
gene id G62582
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16679856 ~ 16680624 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78350
taacttaaaaatgtatttattcagtattttacCAGGCATTCACTTTGCAACCACTGAGctcacacattttattttatgttatgcttgtacatacaaaacacaaaaacatatccAACTATCTCTGAGTTGTGGTTCcagtttgaattattttgtttaacgtTTTAAAGGAAAGGGTGGGAGGGGAAAGAACAACagcccaaaacaaacaaacaaaaacacctctTTTTTCCCACCACAGGCAGAGACATCTCCGTGAGCTTTAACACGACCTTGTGCCGTCCACTTGGTTGGGTCCTCGAGGTACTTAACTGTCCTTCACATTATCTCTGCAAAAGCACTGCGAAAATCTTCCGTTGAcgttgggggaggggggctgcCATAGGTTAACTTCGCTGTCACTGCTGGACTCGGAGTCGCTGCTGCCGGAGTAGGCACCCAGGCCGGGTAGGATGCCCACGCACACCGATGCCGACGGCCGGTGGACCACAGCCCTGCCGCCCACCTCTCTGGCCCCCCCGCCACAGCGCACGCTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106098714

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78350 True 534 lncRNA 0.49 2 16679856 16680624

Neighbor

gene id symbol gene type direction distance location
AMCG00020334 rspry1,LOC106560854 coding downstream 16762 16647262 ~ 16663094 (-)
AMCG00020335 LOC107576748 coding downstream 35365 16641004 ~ 16644491 (-)
AMCG00020333 NA coding downstream 47997 16625238 ~ 16631859 (-)
AMCG00020337 NA coding downstream 65200 16605616 ~ 16614656 (-)
AMCG00020329 NA coding downstream 110256 16558542 ~ 16569600 (-)
AMCG00020340 NA coding upstream 3260 16683884 ~ 16714207 (-)
AMCG00020339 NA coding upstream 45954 16726578 ~ 16757369 (-)
AMCG00020345 NA coding upstream 81453 16762077 ~ 16768960 (-)
AMCG00020348 NA coding upstream 89698 16770322 ~ 16778622 (-)
AMCG00020347 NA coding upstream 98379 16779003 ~ 16791282 (-)
G62580 NA non-coding downstream 10345 16668897 ~ 16669511 (-)
G62475 NA non-coding downstream 198866 16480530 ~ 16480990 (-)
G62283 LOC107575789 non-coding downstream 1256282 15423155 ~ 15423574 (-)
G62191 NA non-coding downstream 1645780 15032135 ~ 15034076 (-)
G62143 NA non-coding downstream 1912293 14703511 ~ 14767563 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding upstream 216246 16896870 ~ 16923733 (-)
G62659 NA non-coding upstream 306695 16987319 ~ 16989284 (-)
G62660 NA non-coding upstream 309643 16990267 ~ 16990714 (-)
G62675 NA non-coding upstream 338166 17018790 ~ 17019552 (-)
G62715 NA non-coding upstream 439530 17120154 ~ 17175835 (-)
AMCG00020336 NA other downstream 54886 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 404283 16272451 ~ 16275573 (-)
G62415 NA other downstream 424737 16252788 ~ 16255119 (-)
G62409 NA other downstream 559703 16118989 ~ 16120153 (-)
AMCG00020316 cnep1r1,tm188,LOC106587574,LOC107551481,LOC107554612 other downstream 577117 16098900 ~ 16102739 (-)
G62618 NA other upstream 112242 16792866 ~ 16793167 (-)
AMCG00020346 nup93,LOC103368977 other upstream 114372 16794996 ~ 16817767 (-)
G62853 necab2 other upstream 930040 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 1306557 17987181 ~ 18015862 (-)
G62961 NA other upstream 1325544 18006168 ~ 18039960 (-)

Expression


Co-expression Network