G62632


Basic Information

Item Value
gene id G62632
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16814374 ~ 16815857 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78405
aaagcaATCATGTTGATGAGAATGCTGGAGAGGGGGGCACGTATAATGTATACACAAAACAGACCAAGTATCCGCTACATTAAAGCGTTTATTTAATTAGaggcaagaaaaataacatgcacttcagtgtattttacaaaaaagctcAGTTGCAGAGATCCGTGTGGAGGCGGGGGTCCGTCAGGGTGGGCGCTGGTCCTCACTTGCAGCAGCTGGTGTCGCAGGTCTGCCCCTTGCACACGCAGCCGGACGCGCACTTACTGCAGCCGGCcgagcagcaggagcagcagcctGTGGGGCAGAGCGGTTCGGGTTGGGTTGGGTTGTGGGATGGAAGATTATGCATCATCTATCATAGCCATTTACCAGATGATTTATTGGATAATTTCTGTAAAGCTTTGGCAATAGAAACACTATTGGCATGACAAGTTCAAGTTAAATTGAACGGACAACGCGAAACACACCAGCGGGTATTTTCGCTAATCCGCCTGGCTGCTGATAATCATCGAGGTGCCCGTTTTACTCTATGCTGAAGACTAACGAGTTtcaatgcatacaaataaaatccgCTTCATGAATGCGAGCACTCACTCTTCTTCTTGCAGCAGCCCTGGCATTTGCAGTCCACGCACTTGCAGCTCTCCCCGCAGTCACAAGACCCGGCTGGGGGAATCTTTGAGCATGCGCAGGATTTTGGATCcattttttcttcccttcttttattttattttgatgcagTCGTGTGCGGGTGAAGTGTGTACTCTGCAGCCGCGCTGCTGTGTATTTATAGCGACTCTCACAGGGCGAAACCGGGTGCAAAGCGAAAACGCACACACGCTCAATGAGGGCCGGCTGTGCACACGGCTTTGCACAACACCCCAGGCGCCCAGTGTGCAAAATGTCCTGAAACAGTGACAAACAATGACTAAGGGAGACTGTGCATTGTTGCAAAATTATGTAAGCATCATTTCCACACCTAGACCGTGGCATTGATTGTAAGTGTACACAGATCAAGAGACCCAGAATAATTGGAACCTGTTAATTGATGTTATGTCATTAGGAAAAACCCGAGGCAAGTGCAAGTGTTTGTATGgaccaagttaaaaaaaaaaagttgaatctATTCCAATTTGCACTGTGGGATTTTGTAGGCTACGCGTGTCAGATACTTATAGCTAATCATGTCGAATAACTTGTCTGAAATATACAAACggaaaataaacactaatataaaagcaaatacaaaagtaaaaagatATCAGATCAATCCTCGTATTCGTATCTGTCTACACATATCTAGCCTATGTATATCTTAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78405 True 1318 TUCP 0.45 2 16814374 16815857

Neighbor

gene id symbol gene type direction distance location
AMCG00020332 NA coding upstream 133750 16666142 ~ 16680624 (+)
AMCG00020330 NA coding upstream 173398 16634102 ~ 16640976 (+)
AMCG00020338 NA coding upstream 197131 16616416 ~ 16617243 (+)
AMCG00020327 cog4,LOC107577202 coding upstream 256917 16550086 ~ 16557457 (+)
AMCG00020326 siah1,LOC106573709 coding upstream 361739 16450836 ~ 16452635 (+)
AMCG00020341 bbs2 coding downstream 1726 16817583 ~ 16825446 (+)
AMCG00020349 NA coding downstream 11262 16827119 ~ 16828366 (+)
AMCG00020352 NA coding downstream 81160 16897017 ~ 16924481 (+)
AMCG00020351 gnao1,LOC103367675,LOC108264367 coding downstream 150414 16966271 ~ 16979660 (+)
AMCG00020350 gnao1a,LOC100693875,LOC105926579,LOC108264367,LOC103138895,LOC106939917 coding downstream 168730 16984587 ~ 16987141 (+)
G62617 NA non-coding upstream 20494 16793664 ~ 16793880 (+)
G62564 NA non-coding upstream 168113 16644938 ~ 16646261 (+)
G62504 NA non-coding upstream 249185 16547736 ~ 16565189 (+)
G62494 NA non-coding upstream 278973 16533356 ~ 16535401 (+)
G62480 NA non-coding upstream 309551 16501784 ~ 16504823 (+)
G62654 NA non-coding downstream 171462 16987319 ~ 16989579 (+)
G62681 nudt21 non-coding downstream 214336 17030193 ~ 17046150 (+)
G62680 NA non-coding downstream 215960 17031817 ~ 17035498 (+)
G62781 NA non-coding downstream 588528 17404385 ~ 17503263 (+)
G62909 NA non-coding downstream 1138466 17954323 ~ 17955274 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other upstream 209716 16582886 ~ 16604658 (+)
AMCG00020281 slc12a4 other upstream 2341829 14467800 ~ 14472545 (+)
AMCG00020273 NA other upstream 2582106 14195784 ~ 14232268 (+)
AMCG00020267 NA other upstream 2863327 13948426 ~ 13951047 (+)
AMCG00020241 cdc26,LOC107743800,LOC107691734,LOC107603191 other upstream 2929258 13882825 ~ 13885116 (+)
AMCG00020370 NA other downstream 617785 17433642 ~ 17442711 (+)
AMCG00020371 nutf2 other downstream 643287 17459144 ~ 17471869 (+)
G62895 NA other downstream 1112471 17928328 ~ 17928904 (+)
AMCG00020408 NA other downstream 1242701 18058558 ~ 18065789 (+)
AMCG00020407 NA other downstream 1251930 18067787 ~ 18072051 (+)

Expression


Co-expression Network