Gene
RNA
| Item | Value |
|---|---|
| gene id | G62654 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 16987319 ~ 16989579 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78429 | True | 1208 | lncRNA | 0.34 | 2 | 16987319 | 16989579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020350 | gnao1a,LOC100693875,LOC105926579,LOC108264367,LOC103138895,LOC106939917 | coding | upstream | 178 | 16984587 ~ 16987141 (+) |
| AMCG00020351 | gnao1,LOC103367675,LOC108264367 | coding | upstream | 7659 | 16966271 ~ 16979660 (+) |
| AMCG00020352 | NA | coding | upstream | 62838 | 16897017 ~ 16924481 (+) |
| AMCG00020349 | NA | coding | upstream | 158953 | 16827119 ~ 16828366 (+) |
| AMCG00020341 | bbs2 | coding | upstream | 161873 | 16817583 ~ 16825446 (+) |
| AMCG00020353 | hsf4,LOC106560841,LOC106573731 | coding | downstream | 14339 | 17003918 ~ 17019277 (+) |
| AMCG00020358 | NA | coding | downstream | 51860 | 17041439 ~ 17042458 (+) |
| AMCG00020360 | tmem170a | coding | downstream | 180412 | 17169991 ~ 17174708 (+) |
| AMCG00020362 | NA | coding | downstream | 186935 | 17176514 ~ 17179026 (+) |
| AMCG00020361 | NA | coding | downstream | 191362 | 17180941 ~ 17189251 (+) |
| G62617 | NA | non-coding | upstream | 193439 | 16793664 ~ 16793880 (+) |
| G62564 | NA | non-coding | upstream | 341058 | 16644938 ~ 16646261 (+) |
| G62504 | NA | non-coding | upstream | 422130 | 16547736 ~ 16565189 (+) |
| G62494 | NA | non-coding | upstream | 451918 | 16533356 ~ 16535401 (+) |
| G62480 | NA | non-coding | upstream | 482496 | 16501784 ~ 16504823 (+) |
| G62681 | nudt21 | non-coding | downstream | 40614 | 17030193 ~ 17046150 (+) |
| G62680 | NA | non-coding | downstream | 42238 | 17031817 ~ 17035498 (+) |
| G62781 | NA | non-coding | downstream | 414806 | 17404385 ~ 17503263 (+) |
| G62909 | NA | non-coding | downstream | 964744 | 17954323 ~ 17955274 (+) |
| G62912 | NA | non-coding | downstream | 991454 | 17981033 ~ 17983521 (+) |
| G62632 | NA | other | upstream | 171462 | 16814374 ~ 16815857 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | upstream | 382661 | 16582886 ~ 16604658 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 2514774 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 2755051 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 3036272 | 13948426 ~ 13951047 (+) |
| AMCG00020370 | NA | other | downstream | 444063 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 469565 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 938749 | 17928328 ~ 17928904 (+) |
| AMCG00020408 | NA | other | downstream | 1068979 | 18058558 ~ 18065789 (+) |
| AMCG00020407 | NA | other | downstream | 1078208 | 18067787 ~ 18072051 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000013_02528016_02529126 | NA | coding | CI01000013 | null | 2527448 ~ 2529246 (+) |
| rainbow trout (Oncorhynchus mykiss) | G106924 | NA | non-coding | NC_048566.1 | CM023220.2 | 2646912 ~ 2647705 (-) |
