G62659


Basic Information

Item Value
gene id G62659
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 16987319 ~ 16989284 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78440
TTAAGTCATGAAAACTGTGGCTTTAATGTAAACACTACATTCGATTGGTTTTGCAGCACAAACATCCCACAGGAGAGAAACACCATTCActaaaaaggaagaaaaaagcagcacaaaaaagcattcactgaaaataaaaaataaaaaatgaaaagagagcCTAACTGgtatatataatacactgtATTCTTTTTCTCAGAGCAAAAAGGCTAAAAGGGAAACAACTTTCCAAATCTACTGGTCAGTGAGAGCTGTGCTTTTTCTATACAGACCCGGAAGGTGAAGAAAGGCAGATCAGATTACAGTTTTAAACTAAGAGAAAGCGCACAAACCTGTACAGCCACACTGTCTCGGGTTAAGACAGCTGTGttccaaagtgtttttttttttaaaaatactccAGGCTAGTAAAGACATTGCAATGCAGGGTAAACAGGCAAAATAATCGGTACAGTTCATAGACATCAATATGGGTAAGTAAGAACGGTATCATGTATCTCAGGACCGTTGCAAAACttttaaaaaaggggaaaaaaaccttCTGTAGCTACAAAGCACAAGAAATagactttaatattattattatcattattattattattattatcatcatcatcataatcatttttttaagcTTCTACTTGTAAAGACTGTGCTAGGACCAGACCTATGGCATTCTACAGACATATTCCGCCCAGGAACCACCGTCTTCAAAATCTTACATCAACTGGGAAGGACGGCTGAGttggtctttattttatttcttttttttccccgttgACGTTTATGTGtcttgttgttgatgttgttttgttttttgtcgtTTTttttttgtcgtttttaattattacatttttttcgaaagcttttacatttttttaatttttttaccttttttttgttgtttgatgtttttttttgtttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78440 True 927 lncRNA 0.33 2 16987319 16989284

Neighbor

gene id symbol gene type direction distance location
AMCG00020343 cbfb,LOC107715607 coding downstream 117141 16867232 ~ 16870178 (-)
AMCG00020344 NA coding downstream 137662 16848880 ~ 16849657 (-)
AMCG00020342 clg19h16orf70,LOC106573725,LOC106560845,LOC105892482,LOC103042166 coding downstream 145809 16828951 ~ 16841510 (-)
AMCG00020347 NA coding downstream 196037 16779003 ~ 16791282 (-)
AMCG00020348 NA coding downstream 208697 16770322 ~ 16778622 (-)
AMCG00020357 NA coding upstream 5601 16994885 ~ 17000013 (-)
AMCG00020356 NA coding upstream 32568 17021852 ~ 17026667 (-)
AMCG00020355 nudt21,LOC107660760,LOC107690386,LOC107721012 coding upstream 38803 17028087 ~ 17032112 (-)
AMCG00020354 NA coding upstream 60066 17049350 ~ 17057242 (-)
AMCG00020359 NA coding upstream 83505 17072789 ~ 17074242 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding downstream 63586 16896870 ~ 16923733 (-)
G62582 NA non-coding downstream 306695 16679856 ~ 16680624 (-)
G62580 NA non-coding downstream 317808 16668897 ~ 16669511 (-)
G62475 NA non-coding downstream 506329 16480530 ~ 16480990 (-)
G62283 LOC107575789 non-coding downstream 1563745 15423155 ~ 15423574 (-)
G62660 NA non-coding upstream 983 16990267 ~ 16990714 (-)
G62675 NA non-coding upstream 29506 17018790 ~ 17019552 (-)
G62715 NA non-coding upstream 130870 17120154 ~ 17175835 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding upstream 375539 17364823 ~ 17370446 (-)
G62880 NA non-coding upstream 858874 17848158 ~ 17851113 (-)
AMCG00020346 nup93,LOC103368977 other downstream 169552 16794996 ~ 16817767 (-)
G62618 NA other downstream 194152 16792866 ~ 16793167 (-)
AMCG00020336 NA other downstream 362349 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 711746 16272451 ~ 16275573 (-)
G62415 NA other downstream 732200 16252788 ~ 16255119 (-)
G62853 necab2 other upstream 621380 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 997897 17987181 ~ 18015862 (-)
G62961 NA other upstream 1016884 18006168 ~ 18039960 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 3299286 20288570 ~ 20299843 (-)
G63464 NA other upstream 4322918 21312202 ~ 21312605 (-)

Expression


Co-expression Network