G62675


Basic Information

Item Value
gene id G62675
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17018790 ~ 17019552 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78464
ctcacattaaaatgtacaaaaaaaaaaaaaaaggaatactaTTTGATGgatatatttctataaatatatataattaaatacatacatacatacatacatacatacatacaatattgcAAGAAAAATTTAATCTAATGCAACCGGATACCAAAAACCTGCTTCACTTACAGACTGCGCTGATTTGGGAGTGCCTATAAACCTCGCCCTCTTTGAAGAAGTGCTGCCAGAGAACAGCCCTTAACTGTTGTGCACAAAAATAACGTATTTTATTCAAATCCCACAGAGCCCCAGAGTTGACATATTGGGGGGGACCCAAACGAGACGAgtttgtgtgaaatgtatttattcctgtgcagattctttttaatttgtgaccACGATTAATTGAAATCCTTGTGTTGTCGATTGATGGGCACGGCTCCCTCAATGGAATCTGAAAATAGGAGGCCCTGATCTGCTTCGGGAGCcgccttttgtttttgttttgttcttttccttGATGTGTGACGGTGGATTTGAAGATCAGTACTTTGATCCATCTTATGCAATGAAATGCTTCTGTAGGAGAATGCCAAGTTAGAGTGAGGGCGCGTAACTGGGTTCAAAATGACGCCAAAGCCTCTGTCAGTCAGCGGTCGGTCTGTGGGACCCGGCGGACAGTAAAGCaggatggtggtggtgggggggtgcagaCGCTGTTCCACTACAAACAGAGTACCCGCTGACAGCCTCTGCCCTCCAGTCCGTTACAGCAAAGGTGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78464 True 763 lncRNA 0.43 1 17018790 17019552

Neighbor

gene id symbol gene type direction distance location
AMCG00020357 NA coding downstream 18777 16994885 ~ 17000013 (-)
AMCG00020343 cbfb,LOC107715607 coding downstream 148612 16867232 ~ 16870178 (-)
AMCG00020344 NA coding downstream 169133 16848880 ~ 16849657 (-)
AMCG00020342 clg19h16orf70,LOC106573725,LOC106560845,LOC105892482,LOC103042166 coding downstream 177280 16828951 ~ 16841510 (-)
AMCG00020347 NA coding downstream 227508 16779003 ~ 16791282 (-)
AMCG00020356 NA coding upstream 2300 17021852 ~ 17026667 (-)
AMCG00020355 nudt21,LOC107660760,LOC107690386,LOC107721012 coding upstream 8535 17028087 ~ 17032112 (-)
AMCG00020354 NA coding upstream 29798 17049350 ~ 17057242 (-)
AMCG00020359 NA coding upstream 53237 17072789 ~ 17074242 (-)
AMCG00020363 NA coding upstream 119110 17138662 ~ 17139769 (-)
G62660 NA non-coding downstream 28076 16990267 ~ 16990714 (-)
G62659 NA non-coding downstream 29506 16987319 ~ 16989284 (-)
G62655 gnao1a,gnao1,LOC108264367,LOC108249535,LOC106925363,LOC103367675 non-coding downstream 95057 16896870 ~ 16923733 (-)
G62582 NA non-coding downstream 338166 16679856 ~ 16680624 (-)
G62580 NA non-coding downstream 349279 16668897 ~ 16669511 (-)
G62715 NA non-coding upstream 100602 17120154 ~ 17175835 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding upstream 345271 17364823 ~ 17370446 (-)
G62880 NA non-coding upstream 828606 17848158 ~ 17851113 (-)
G62951 cnot1 non-coding upstream 948681 17968233 ~ 17969691 (-)
G62981 NA non-coding upstream 1117928 18137480 ~ 18138298 (-)
AMCG00020346 nup93,LOC103368977 other downstream 201023 16794996 ~ 16817767 (-)
G62618 NA other downstream 225623 16792866 ~ 16793167 (-)
AMCG00020336 NA other downstream 393820 16616323 ~ 16624970 (-)
G62421 LOC103138816,LOC103466733,LOC108251456 other downstream 743217 16272451 ~ 16275573 (-)
G62415 NA other downstream 763671 16252788 ~ 16255119 (-)
G62853 necab2 other upstream 591112 17610664 ~ 17626189 (-)
AMCG00020403 NA other upstream 967629 17987181 ~ 18015862 (-)
G62961 NA other upstream 986616 18006168 ~ 18039960 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 3269018 20288570 ~ 20299843 (-)
G63464 NA other upstream 4292650 21312202 ~ 21312605 (-)

Expression


Co-expression Network