Gene
RNA
| Item | Value |
|---|---|
| gene id | G62680 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 17031817 ~ 17035498 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046116 | queuosine metabolic process | biological_process |
| GO:0008616 | queuosine biosynthetic process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0006260 | DNA replication | biological_process |
| GO:0006269 | DNA replication, synthesis of RNA primer | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78470 | True | 1142 | lncRNA | 0.50 | 4 | 17031817 | 17035498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020353 | hsf4,LOC106560841,LOC106573731 | coding | upstream | 12540 | 17003918 ~ 17019277 (+) |
| AMCG00020350 | gnao1a,LOC100693875,LOC105926579,LOC108264367,LOC103138895,LOC106939917 | coding | upstream | 44676 | 16984587 ~ 16987141 (+) |
| AMCG00020351 | gnao1,LOC103367675,LOC108264367 | coding | upstream | 52157 | 16966271 ~ 16979660 (+) |
| AMCG00020352 | NA | coding | upstream | 107336 | 16897017 ~ 16924481 (+) |
| AMCG00020349 | NA | coding | upstream | 203451 | 16827119 ~ 16828366 (+) |
| AMCG00020358 | NA | coding | downstream | 5941 | 17041439 ~ 17042458 (+) |
| AMCG00020360 | tmem170a | coding | downstream | 134493 | 17169991 ~ 17174708 (+) |
| AMCG00020362 | NA | coding | downstream | 141016 | 17176514 ~ 17179026 (+) |
| AMCG00020361 | NA | coding | downstream | 145443 | 17180941 ~ 17189251 (+) |
| AMCG00020365 | NA | coding | downstream | 202310 | 17237808 ~ 17258957 (+) |
| G62654 | NA | non-coding | upstream | 42238 | 16987319 ~ 16989579 (+) |
| G62617 | NA | non-coding | upstream | 237937 | 16793664 ~ 16793880 (+) |
| G62564 | NA | non-coding | upstream | 385556 | 16644938 ~ 16646261 (+) |
| G62504 | NA | non-coding | upstream | 466628 | 16547736 ~ 16565189 (+) |
| G62494 | NA | non-coding | upstream | 496416 | 16533356 ~ 16535401 (+) |
| G62781 | NA | non-coding | downstream | 368887 | 17404385 ~ 17503263 (+) |
| G62909 | NA | non-coding | downstream | 918825 | 17954323 ~ 17955274 (+) |
| G62912 | NA | non-coding | downstream | 945535 | 17981033 ~ 17983521 (+) |
| G62916 | NA | non-coding | downstream | 952350 | 17987848 ~ 18032139 (+) |
| G62975 | NA | non-coding | downstream | 1099495 | 18134993 ~ 18138267 (+) |
| G62632 | NA | other | upstream | 215960 | 16814374 ~ 16815857 (+) |
| AMCG00020331 | st3gal2,LOC107686287,LOC106573711,LOC107672232 | other | upstream | 427159 | 16582886 ~ 16604658 (+) |
| AMCG00020281 | slc12a4 | other | upstream | 2559272 | 14467800 ~ 14472545 (+) |
| AMCG00020273 | NA | other | upstream | 2799549 | 14195784 ~ 14232268 (+) |
| AMCG00020267 | NA | other | upstream | 3080770 | 13948426 ~ 13951047 (+) |
| AMCG00020370 | NA | other | downstream | 398144 | 17433642 ~ 17442711 (+) |
| AMCG00020371 | nutf2 | other | downstream | 423646 | 17459144 ~ 17471869 (+) |
| G62895 | NA | other | downstream | 892830 | 17928328 ~ 17928904 (+) |
| AMCG00020408 | NA | other | downstream | 1023060 | 18058558 ~ 18065789 (+) |
| AMCG00020407 | NA | other | downstream | 1032289 | 18067787 ~ 18072051 (+) |
