G62895


Basic Information

Item Value
gene id G62895
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17928328 ~ 17928904 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78735
CCAGGTTCAAAAGCTGAATTTGCGCTGCACCTTGATGAATGCCTGGTCTCGCATTCGTGATGGCCCTGTGGTGTCAGACAGCTTCTCCAGGACCCCCACGTTCTGCTCGATGGTGTGCAGCGTGTCCTCCAGCTGCTCCACGTGTGCCTCGATGCTGCCCAGGACCCGAGCTTCCTCCTGGGAAAGCACCTGCAAGGCCTTCTGCTCCTCCTTCTGCAGGGCCTGCCGCATGGACTCGTACTGCTGCTGCACGTGGGCCCGCGCCTCACTCACCATCCGCTAGGGAACCGCAGCAAACCCCAGTTAACCCTCGTCTCCCTTCACCTCCTCCTGTGCCTCGTGTAGGTACACAAACCCCTTTTTGTTAACTTAGCTTGTCTGCTAATACAGCTGTCTAGTTCAGTGATCTGCCACCGTTTTGGGAGGAATCAAATAGCTCAGTTCGTTTGGGCATAGGGCTGACAAAACCAGGGCCTGCTCTAGGTCTCAAGGTAAAGTGCTAGTAACCCACTCTGTGCTGTAGCCACTAATACCTCATCAACCTTTCCAGGTGACCTGATGCACTGCTGGTGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78735 True 577 TUCP 0.56 1 17928328 17928904

Neighbor

gene id symbol gene type direction distance location
AMCG00020393 got2,got2a,LOC107694944,LOC107596935,LOC107738675,LOC107672286,LOC107726360,LOC107707915 coding upstream 1912 17917969 ~ 17926416 (+)
AMCG00020399 NA coding upstream 16188 17905597 ~ 17912140 (+)
AMCG00020387 calb2,LOC106573754,LOC105904495,LOC106560817 coding upstream 39541 17872823 ~ 17888787 (+)
AMCG00020388 NA coding upstream 79978 17837383 ~ 17848350 (+)
AMCG00020386 NA coding upstream 97262 17824817 ~ 17831066 (+)
AMCG00020394 slc38a7,LOC107707914,LOC107711584,LOC107596460 coding downstream 2025 17930929 ~ 17941836 (+)
AMCG00020396 NA coding downstream 16254 17945158 ~ 17950059 (+)
AMCG00020395 cnot1 coding downstream 27804 17956708 ~ 17980551 (+)
AMCG00020406 e2f4,LOC106573204 coding downstream 190809 18119713 ~ 18134812 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding downstream 209983 18138887 ~ 18178120 (+)
G62781 NA non-coding upstream 425065 17404385 ~ 17503263 (+)
G62681 nudt21 non-coding upstream 882178 17030193 ~ 17046150 (+)
G62680 NA non-coding upstream 892830 17031817 ~ 17035498 (+)
G62654 NA non-coding upstream 938749 16987319 ~ 16989579 (+)
G62617 NA non-coding upstream 1134448 16793664 ~ 16793880 (+)
G62909 NA non-coding downstream 25419 17954323 ~ 17955274 (+)
G62912 NA non-coding downstream 52129 17981033 ~ 17983521 (+)
G62916 NA non-coding downstream 58944 17987848 ~ 18032139 (+)
G62975 NA non-coding downstream 206089 18134993 ~ 18138267 (+)
G62989 NA non-coding downstream 268675 18197579 ~ 18200808 (+)
AMCG00020371 nutf2 other upstream 456459 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 485617 17433642 ~ 17442711 (+)
G62632 NA other upstream 1112471 16814374 ~ 16815857 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other upstream 1323670 16582886 ~ 16604658 (+)
AMCG00020281 slc12a4 other upstream 3455783 14467800 ~ 14472545 (+)
AMCG00020408 NA other downstream 129654 18058558 ~ 18065789 (+)
AMCG00020407 NA other downstream 138883 18067787 ~ 18072051 (+)
G63045 NA other downstream 403665 18332569 ~ 18334032 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1668299 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1702421 19631325 ~ 19636221 (+)

Expression


Co-expression Network