G62916


Basic Information

Item Value
gene id G62916
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 17987848 ~ 18032139 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78763
CTGTAGCCCAGCACCTGTGTGTCCTGAGTGGTGGCGTGGAAGACACTGAGAGGGACGACGCTTCCATAGCGCTGCACTTCATGGATCACAGCTTGGACATAGGGCATGCTGTGCCTGTCCTCATAGCagacctgctctctctctccaaggaCAGTGTCGATCTCCTGGTGGCACCGTGCTGAGGAGAGGAGGGCCCACTGTCAGCAGCTCAGCACACTAGACACCTCTACAGAGTTGCCAATTATCCATGCTTCACAGCTAATGCCTTTGCCTGCTAGGGGTTCTGTAGCATTGACGTTTCTAGTCAATGGAAGACTAATGAGTGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78763 True 328 lncRNA 0.54 2 17987848 18032139

Neighbor

gene id symbol gene type direction distance location
AMCG00020395 cnot1 coding upstream 7297 17956708 ~ 17980551 (+)
AMCG00020396 NA coding upstream 37789 17945158 ~ 17950059 (+)
AMCG00020394 slc38a7,LOC107707914,LOC107711584,LOC107596460 coding upstream 46012 17930929 ~ 17941836 (+)
AMCG00020393 got2,got2a,LOC107694944,LOC107596935,LOC107738675,LOC107672286,LOC107726360,LOC107707915 coding upstream 61432 17917969 ~ 17926416 (+)
AMCG00020399 NA coding upstream 75708 17905597 ~ 17912140 (+)
AMCG00020406 e2f4,LOC106573204 coding downstream 87574 18119713 ~ 18134812 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding downstream 106748 18138887 ~ 18178120 (+)
AMCG00020412 LOC107707912 coding downstream 149937 18182076 ~ 18186048 (+)
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding downstream 155060 18187199 ~ 18195630 (+)
AMCG00020415 NA coding downstream 306298 18338437 ~ 18358845 (+)
G62912 NA non-coding upstream 4327 17981033 ~ 17983521 (+)
G62909 NA non-coding upstream 32574 17954323 ~ 17955274 (+)
G62781 NA non-coding upstream 484585 17404385 ~ 17503263 (+)
G62681 nudt21 non-coding upstream 941698 17030193 ~ 17046150 (+)
G62680 NA non-coding upstream 952350 17031817 ~ 17035498 (+)
G62975 NA non-coding downstream 102854 18134993 ~ 18138267 (+)
G62989 NA non-coding downstream 165440 18197579 ~ 18200808 (+)
G62990 kifc3,LOC107670565 non-coding downstream 169705 18201844 ~ 18202070 (+)
G62991 NA non-coding downstream 172821 18204960 ~ 18205970 (+)
G62992 NA non-coding downstream 176272 18208411 ~ 18208650 (+)
G62895 NA other upstream 58944 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 515979 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 545137 17433642 ~ 17442711 (+)
G62632 NA other upstream 1171991 16814374 ~ 16815857 (+)
AMCG00020331 st3gal2,LOC107686287,LOC106573711,LOC107672232 other upstream 1383190 16582886 ~ 16604658 (+)
AMCG00020408 NA other downstream 26419 18058558 ~ 18065789 (+)
AMCG00020407 NA other downstream 35648 18067787 ~ 18072051 (+)
G63045 NA other downstream 300430 18332569 ~ 18334032 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1565064 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1599186 19631325 ~ 19636221 (+)

Expression


Co-expression Network