Gene
RNA
| Item | Value |
|---|---|
| gene id | G62961 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 18006168 ~ 18039960 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78814 | True | 697 | TUCP | 0.48 | 5 | 18006168 | 18015860 |
| TU78822 | False | 602 | TUCP | 0.52 | 4 | 18037042 | 18039960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020400 | NA | coding | downstream | 21527 | 17981395 ~ 17984641 (-) |
| AMCG00020398 | NA | coding | downstream | 50242 | 17950334 ~ 17955926 (-) |
| AMCG00020397 | NA | coding | downstream | 75578 | 17926512 ~ 17930590 (-) |
| AMCG00020389 | NA | coding | downstream | 189280 | 17813315 ~ 17816888 (-) |
| AMCG00020390 | NA | coding | downstream | 195521 | 17805531 ~ 17810647 (-) |
| AMCG00020401 | NA | coding | upstream | 10873 | 18050833 ~ 18055929 (-) |
| AMCG00020404 | NA | coding | upstream | 31336 | 18071296 ~ 18079151 (-) |
| AMCG00020411 | NA | coding | upstream | 49139 | 18089099 ~ 18092504 (-) |
| AMCG00020410 | NA | coding | upstream | 64228 | 18104188 ~ 18110182 (-) |
| AMCG00020409 | NA | coding | upstream | 131660 | 18171620 ~ 18175979 (-) |
| G62951 | cnot1 | non-coding | downstream | 36477 | 17968233 ~ 17969691 (-) |
| G62880 | NA | non-coding | downstream | 155055 | 17848158 ~ 17851113 (-) |
| G62770 | pard6a,LOC108250860,LOC106523998,LOC107101591 | non-coding | downstream | 635722 | 17364823 ~ 17370446 (-) |
| G62715 | NA | non-coding | downstream | 830333 | 17120154 ~ 17175835 (-) |
| G62675 | NA | non-coding | downstream | 986616 | 17018790 ~ 17019552 (-) |
| G62981 | NA | non-coding | upstream | 97520 | 18137480 ~ 18138298 (-) |
| G63015 | NA | non-coding | upstream | 144048 | 18184008 ~ 18186050 (-) |
| G63057 | NA | non-coding | upstream | 317865 | 18357825 ~ 18358910 (-) |
| G63092 | NA | non-coding | upstream | 357507 | 18397467 ~ 18398731 (-) |
| G63096 | NA | non-coding | upstream | 396565 | 18436525 ~ 18436939 (-) |
| G62853 | necab2 | other | downstream | 379979 | 17610664 ~ 17626189 (-) |
| AMCG00020346 | nup93,LOC103368977 | other | downstream | 1188401 | 16794996 ~ 16817767 (-) |
| G62618 | NA | other | downstream | 1213001 | 16792866 ~ 16793167 (-) |
| AMCG00020336 | NA | other | downstream | 1381198 | 16616323 ~ 16624970 (-) |
| G62421 | LOC103138816,LOC103466733,LOC108251456 | other | downstream | 1730595 | 16272451 ~ 16275573 (-) |
| AMCG00020446 | cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 | other | upstream | 2248610 | 20288570 ~ 20299843 (-) |
| G63464 | NA | other | upstream | 3272242 | 21312202 ~ 21312605 (-) |
| AMCG00020471 | NA | other | upstream | 4090882 | 22130842 ~ 22132737 (-) |
| AMCG00020489 | rnf166,LOC106587267,LOC106562062,LOC107685853 | other | upstream | 4400832 | 22440792 ~ 22466767 (-) |
| G63679 | NA | other | upstream | 4503882 | 22543842 ~ 22544689 (-) |
