G62992


Basic Information

Item Value
gene id G62992
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18208411 ~ 18208650 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78863
CTTGACATGGGGTGGCTTAGCGGCCTGCCTGGCCAGGGTGTGCTGGCAGTCTCTGAGCTTGTGTCCCAGCTGCTCCTCCATCTCGTCCTTTTCTCGGCGCGAGTCCTCCAGCCTCATCTCCAGTTGCGTCACCTGGCCAGCCTTCTCCTCCAGCCCGCGCTCCAGCTCTGCCAGCTGCCGCTCCTTCTCCCGCACCTCCACCTCCCTCTGGGCCAGCTGGGAGCGCAGAGACTCTGCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78863 True 240 lncRNA 0.65 1 18208411 18208650

Neighbor

gene id symbol gene type direction distance location
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding upstream 12781 18187199 ~ 18195630 (+)
AMCG00020412 LOC107707912 coding upstream 22363 18182076 ~ 18186048 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding upstream 30291 18138887 ~ 18178120 (+)
AMCG00020406 e2f4,LOC106573204 coding upstream 73599 18119713 ~ 18134812 (+)
AMCG00020395 cnot1 coding upstream 227860 17956708 ~ 17980551 (+)
AMCG00020415 NA coding downstream 129787 18338437 ~ 18358845 (+)
AMCG00020420 NA coding downstream 173493 18382143 ~ 18389911 (+)
AMCG00020419 NA coding downstream 187207 18395857 ~ 18398731 (+)
AMCG00020425 ccdc102a,LOC106562045,LOC107594240,LOC107081377,LOC103376291 coding downstream 301813 18510463 ~ 18522856 (+)
AMCG00020426 ccdc102a,LOC106587147,LOC106562045,LOC107674431,LOC107754670 coding downstream 321528 18530178 ~ 18536093 (+)
G62991 NA non-coding upstream 2441 18204960 ~ 18205970 (+)
G62990 kifc3,LOC107670565 non-coding upstream 6341 18201844 ~ 18202070 (+)
G62989 NA non-coding upstream 7603 18197579 ~ 18200808 (+)
G62975 NA non-coding upstream 70144 18134993 ~ 18138267 (+)
G62916 NA non-coding upstream 176272 17987848 ~ 18032139 (+)
G62993 NA non-coding downstream 1488 18210138 ~ 18210377 (+)
G62994 NA non-coding downstream 2119 18210769 ~ 18211029 (+)
G63058 NA non-coding downstream 151625 18360275 ~ 18360493 (+)
G63068 NA non-coding downstream 184416 18393066 ~ 18393306 (+)
G63069 NA non-coding downstream 185451 18394101 ~ 18394306 (+)
AMCG00020407 NA other upstream 136360 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 142622 18058558 ~ 18065789 (+)
G62895 NA other upstream 279507 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 736542 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 765700 17433642 ~ 17442711 (+)
G63045 NA other downstream 123919 18332569 ~ 18334032 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1388553 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1422675 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 3926718 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 4147524 22356174 ~ 22409493 (+)

Expression


Co-expression Network