G62993


Basic Information

Item Value
gene id G62993
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18210138 ~ 18210377 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78864
CCCACCACCACCTTGCCCATTTGCCAGGTCCCTTGCTGGTGCCCCCGGCTCCTGGCATACCTGAGAACGCAGTCTGCCAATAACGGCCTGCTGCTCGCTCTCCCGGCAGCACAGCCGGTCCTGGGTGAGATACAGCTCCTCTTGCAGTTGGCTCCTCTCCTCCTGCACTGAGTTCAGGGACTCCACCAGTCTCTGCACCGAGGGCCCCGGCCTGCTGCCCAAGCTGGAGCGCCGCCCCcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78864 True 240 lncRNA 0.66 1 18210138 18210377

Neighbor

gene id symbol gene type direction distance location
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding upstream 14508 18187199 ~ 18195630 (+)
AMCG00020412 LOC107707912 coding upstream 24090 18182076 ~ 18186048 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding upstream 32018 18138887 ~ 18178120 (+)
AMCG00020406 e2f4,LOC106573204 coding upstream 75326 18119713 ~ 18134812 (+)
AMCG00020395 cnot1 coding upstream 229587 17956708 ~ 17980551 (+)
AMCG00020415 NA coding downstream 128060 18338437 ~ 18358845 (+)
AMCG00020420 NA coding downstream 171766 18382143 ~ 18389911 (+)
AMCG00020419 NA coding downstream 185480 18395857 ~ 18398731 (+)
AMCG00020425 ccdc102a,LOC106562045,LOC107594240,LOC107081377,LOC103376291 coding downstream 300086 18510463 ~ 18522856 (+)
AMCG00020426 ccdc102a,LOC106587147,LOC106562045,LOC107674431,LOC107754670 coding downstream 319801 18530178 ~ 18536093 (+)
G62992 NA non-coding upstream 1488 18208411 ~ 18208650 (+)
G62991 NA non-coding upstream 4168 18204960 ~ 18205970 (+)
G62990 kifc3,LOC107670565 non-coding upstream 8068 18201844 ~ 18202070 (+)
G62989 NA non-coding upstream 9330 18197579 ~ 18200808 (+)
G62975 NA non-coding upstream 71871 18134993 ~ 18138267 (+)
G62994 NA non-coding downstream 392 18210769 ~ 18211029 (+)
G63058 NA non-coding downstream 149898 18360275 ~ 18360493 (+)
G63068 NA non-coding downstream 182689 18393066 ~ 18393306 (+)
G63069 NA non-coding downstream 183724 18394101 ~ 18394306 (+)
G63097 NA non-coding downstream 227825 18438202 ~ 18440919 (+)
AMCG00020407 NA other upstream 138087 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 144349 18058558 ~ 18065789 (+)
G62895 NA other upstream 281234 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 738269 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 767427 17433642 ~ 17442711 (+)
G63045 NA other downstream 122192 18332569 ~ 18334032 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1386826 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1420948 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 3924991 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 4145797 22356174 ~ 22409493 (+)

Expression


Co-expression Network