G63045


Basic Information

Item Value
gene id G63045
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18332569 ~ 18334032 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78921
GCAGCCCATGCATTTGCATGAAGTGAAGTCGCGCCGCTCCCAGTGCGGTCCAAGTCATGAAACAGTTCCCCCACAATCTACAAGAAACCCACTGCCTGCAGCGGTCCAGCAGCATGCACACCGACTTGCGTCTTCAATCACACATCTGCGCGAATGTGAACATAATCATAATCACCTCAGAGTTGAACGCGTGGTCCCCAGCCCCGCACGCCCCGCCGCTGCAGACCAGGACCACCAGCAACGGCACGAGATTCAGTTTCCAGGGCGACGCGGTCCCGCACGTCCTCGAGGGTCCCATCCCGTCGCGCGCTGGCTGTGCGGGTCTGCGGCGCTGTGCGGGTCCGGCTGCGTGCGTGCCTGCGTGCGTGCGTGCTCCGTGCGTGTCGCTAAGGATGGACTTGTTTTTGCATTCACGAAATCACGGTTTAAGTTCCCTTTCCCGAAATACACACTGGAGGAAAGCGCGCTGTACTGGGGCTGAATCAAAAGCGCCTACAACTGCAGGTCATTCCCCTAATCAGTCTTCATAGTATTTCTGGCGAGCGCAGAGACTGggatttcttgtttgtttgtttgtttgtttgttttgctttgtcaaATTGTAAACATGCACTTTTCCTTTTTGGGAGCTCCTGGTATAGGCATCTCTGTTTTTGTTCCCTTGCTTTTTTCTGTATTCAGGTCCAGTCCTACATGAGTCCCAGGAGAGAGCTCCAAAATAGCCCAGTGAGCCGCTGTACCCTAGCCCAGCTTTTCTAGGAGAAGGGCTGAAAAGCCAGCGCGTTGTGCCAGATCTTTATTGGCAATTTCCCTGCCAGTGCTGATCTGAAAACCAATGAAGCACCAGGTTGATTGCACCCTTCCCAATGACCCACGTTACAATTATAGAAGCCcccaacaaacaaaagaaatatataataatctaaTTTAGCAACTGTTTTAGGCAATCAACACTCTTGCCCCGAGACAAATGAGTTGCTTCGTTTTATTATACTCATTTGCAGAAATGTCACGCCGCAAATAAAGAAATTAGCCTAGCAATTACTGTACCTACGGTATAATAAAGGTGGCCAACGGGAAACAACACAACACGACGGCTGAAATGACAGTAACTAGAGAACTGGTGGAAGCGTTGAGCAGATACGGTCGTGTGTCCATTCAAAGAAGAGTCCACAACATTAACAGAAAGCTCTCACAACGTCCCCGGTTGCCAGAATAATGACGCCTGCCTTTGTATTGCAGCCTCGCTTATAAAGATTTAATGTgatggtgtgtgttttttttttcttgcccgTTAAAATCCAGGTTTTCTTTCAATTTTCCAGGACTGTATTCACTTGTGTGCGCTGCTTTTTGGAGCTCCCCCGGGCTGATGTTAATACTCTTTCAGGCAGACAGACGCGCTGTTGGCTTGCCGACTCCAAGTGAGCTCTTGGGTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78921 True 1442 TUCP 0.49 2 18332569 18334032

Neighbor

gene id symbol gene type direction distance location
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding upstream 136939 18187199 ~ 18195630 (+)
AMCG00020412 LOC107707912 coding upstream 146521 18182076 ~ 18186048 (+)
AMCG00020405 elmo3,LOC106561448,LOC105018213,LOC107732817,LOC107665726 coding upstream 154449 18138887 ~ 18178120 (+)
AMCG00020406 e2f4,LOC106573204 coding upstream 197757 18119713 ~ 18134812 (+)
AMCG00020395 cnot1 coding upstream 352018 17956708 ~ 17980551 (+)
AMCG00020415 NA coding downstream 4405 18338437 ~ 18358845 (+)
AMCG00020420 NA coding downstream 48111 18382143 ~ 18389911 (+)
AMCG00020419 NA coding downstream 61825 18395857 ~ 18398731 (+)
AMCG00020425 ccdc102a,LOC106562045,LOC107594240,LOC107081377,LOC103376291 coding downstream 176431 18510463 ~ 18522856 (+)
AMCG00020426 ccdc102a,LOC106587147,LOC106562045,LOC107674431,LOC107754670 coding downstream 196146 18530178 ~ 18536093 (+)
G62994 NA non-coding upstream 121540 18210769 ~ 18211029 (+)
G62993 NA non-coding upstream 122192 18210138 ~ 18210377 (+)
G62992 NA non-coding upstream 123919 18208411 ~ 18208650 (+)
G62991 NA non-coding upstream 126599 18204960 ~ 18205970 (+)
G62990 kifc3,LOC107670565 non-coding upstream 130499 18201844 ~ 18202070 (+)
G63058 NA non-coding downstream 26243 18360275 ~ 18360493 (+)
G63068 NA non-coding downstream 59034 18393066 ~ 18393306 (+)
G63069 NA non-coding downstream 60069 18394101 ~ 18394306 (+)
G63097 NA non-coding downstream 104170 18438202 ~ 18440919 (+)
G63203 LOC101154678 non-coding downstream 948926 19282958 ~ 19283173 (+)
AMCG00020407 NA other upstream 260518 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 266780 18058558 ~ 18065789 (+)
G62895 NA other upstream 403665 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 860700 17459144 ~ 17471869 (+)
AMCG00020370 NA other upstream 889858 17433642 ~ 17442711 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1263171 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1297293 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 3801336 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 4022142 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 4719766 23053798 ~ 23062149 (+)

Expression


Co-expression Network