G63057


Basic Information

Item Value
gene id G63057
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18357825 ~ 18358910 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78936
CTCAGGCTTCTGTATcacactatatttaaaaaaaacattgagcaCTCTGTACAGCTCATGTACtgaacaatgtttatttattgaacaatGCAATTATGTAtctgcttgcttgtttgtttgtttacaggtGTGTAGACCACAAAAGTACATCTGTCACAATAGTTGTGAATAGAAATAGTTAaattttagtttattaaatctaaaaacaacaaatagaaGGTATCTGCCCCAGCCCACCAATAAGAtgtcttattttaatacaataatactgaAATGCTCAATGTATAAACAAtattgctactactactactgctactactaaaaTAATAGTACTAAACTTAAATTGTAACTGTACATCAAACCCTTGCAATtcaaattttcattttcattttcaattgcaGTAAGAAACATTGTCATGGGGCAGGGGGACAAGCCTGACCCACAGCCTAGAAGAAGCCGGGGAAGAATCGCTGAGCCAGGTTGCCAAGCCATAAGATCCTGTCAGGTCCCCGAGCTTTGGGTGGCCATGGTGGCGGAACCTCGACTGGCTCTCTGCTTCGAAAGGAAGTacctcagaaaaataaaaaaaACCTTGTAGTGAATTGAGGATGGTGAAGAGATAGATGCCTGTTAGCTCCAGGGGCCCAAATGAGAAGAAGGCCAGGCCCCAGGTTGTGCCCAGTAGGAAGGTGATGCCCAGCACAGTGCCTACATCCTGACAGGCACTGCGATTCTCCCCGGAGACCTTGTTGGACCTCATGGACATTATCTTCTTCACCGTGATGCTCAGCATGACCAGGTTAAACAGACACACCAGGAACACCAAACTCAGGATTGTCACATTC

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78936 True 845 lncRNA 0.42 2 18357825 18358910

Neighbor

gene id symbol gene type direction distance location
AMCG00020416 NA coding downstream 23793 18314671 ~ 18334032 (-)
AMCG00020418 NA coding downstream 66220 18247657 ~ 18291605 (-)
AMCG00020417 NA coding downstream 110170 18235639 ~ 18247655 (-)
AMCG00020414 NA coding downstream 132195 18195740 ~ 18225630 (-)
AMCG00020409 NA coding downstream 181846 18171620 ~ 18175979 (-)
AMCG00020422 NA coding upstream 31896 18390806 ~ 18395296 (-)
AMCG00020424 NA coding upstream 39924 18398834 ~ 18415770 (-)
AMCG00020421 NA coding upstream 60272 18419182 ~ 18431255 (-)
AMCG00020423 NA coding upstream 79294 18438204 ~ 18454657 (-)
AMCG00020434 NA coding upstream 515992 18874902 ~ 18901561 (-)
G63015 NA non-coding downstream 171775 18184008 ~ 18186050 (-)
G62981 NA non-coding downstream 219527 18137480 ~ 18138298 (-)
G62951 cnot1 non-coding downstream 388134 17968233 ~ 17969691 (-)
G62880 NA non-coding downstream 506712 17848158 ~ 17851113 (-)
G62770 pard6a,LOC108250860,LOC106523998,LOC107101591 non-coding downstream 987379 17364823 ~ 17370446 (-)
G63092 NA non-coding upstream 38557 18397467 ~ 18398731 (-)
G63096 NA non-coding upstream 77615 18436525 ~ 18436939 (-)
G63180 NA non-coding upstream 718567 19077477 ~ 19077758 (-)
G63257 NA non-coding upstream 1275384 19634294 ~ 19636243 (-)
G63346 NA non-coding upstream 1897012 20255922 ~ 20256399 (-)
G62961 NA other downstream 317865 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 341963 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 731636 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 1540058 16794996 ~ 16817767 (-)
G62618 NA other downstream 1564658 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 1929660 20288570 ~ 20299843 (-)
G63464 NA other upstream 2953292 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 3771932 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 4081882 22440792 ~ 22466767 (-)
G63679 NA other upstream 4184932 22543842 ~ 22544689 (-)

Expression


Co-expression Network