G63097


Basic Information

Item Value
gene id G63097
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 18438202 ~ 18440919 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU78983
TGCGAGCAATGACAAaggctttattaaaaaataaactatctagattaaataaatacatttagagacAACAATAGAGAAGTTAAATTTTACAACATAGCTTCCCAAAAAAAGGGGAAAGCCATAGAGGGTAATGCTTGATGATTATACACATTAGTATaacaaactatacattttttaacagagAAACAATTTTGAATCTCAAATCTATAGAAAACAGCATGggcttttaaaagtatttatatacattattttcagtgtttggcTTTAACAGTTGTGCTCTGTATGTACAGGATTAACGAGAATAATGGCCAAATTGTGCCAGTGGTGTGACATTGCCCAAGTCCATGTCCTCTTTAGTTTGGAACAAGAGGGAGTTTTCCTCACTGCTGAAGAGATTCCTGCCACCTACTGGTGACACttgtactttttatgttttttttgattttttttaatgggctGTCTGGCAAAATACAGAGACTAttcaaacagataaataaataaaattcacaGATTTAAACTCTCATGTGCAGGGATATTCTTATTTACCATACAAATTCTGAAAGATCGATGGAATGCTTAATGCATAACTTATTGTGGCAGTGTTGCCACAAATTTTCAAATAAAGTCCAATTTCCAAACACAGGCAGGTAAAAGCACAATACAGCGCAGTTTGATTTGCGGCAGCACATCACTTTCATGTCTTTCTTTGCACATGTGAGGGGATCCATAATTCACTGCAACAGACTTCTTGCGCTTGCTTCTAGTTCAGATTAGATCCACAAAACAGGGTCACAAATACCATGTCTCTAAATAGCAATTCGGTTATTGATAACCCTTGTTTTTTTCGGATGCACAGCATGTGAGTGGCCTGTGTTTTATAGTTTGCTGCCTTTCCCTGAGATTCAGTCGTGAGACAGGACAGGAGTGTCCGCCCCTGCCACAGACAAAGAGCGACATGACCCAGTCTCTGAAGTCCTTCCCTCCGGTGTCCCTCTATTGTGTCTGCGACACTAAGTGTGCGTTGGCCCCAGTCTGATTCCCACGCAAAGAGTATCGCTCTGATCCAGACCCGGAGAACCCACTCTGGTTGGAGGAGGAGCGGCGCTGGAAAAGGTAGAACCGCAGGCAAAGGAAAAACCCCCTGGAGGGAGTTAACGATGCAGAACAAGAACTGAACAGGCACGGTCAAGGGTCCGAAGTTAAAGAAGGCCAGGCCCCATGTGATCCCGAACAAGCAGTTCATTCCCCAGATGCTGATGAGCATAATGTGCTTATCCTTCCAGGGCCCTCTGTCCTGAATATTGATGACCAAGCACACCAGCATGGCCAAATTGAAAAAGAAGATTACTGAGAAGACGCCGATGTTTGTAATGTAGTGCACCAGGTCTTCTGTAATCCATACATTGAGGCCTCCGTGTTTTCCTCCGATATGATGCGGAGCTCTCCGTAGAAATTACCACTCAATAAAACCACGGCCACCACAATTAGCGGTAAGCCTAGGAAACACaatccaaatgtatttatgtgcaACACACCACCACAATGCATACTACCAACAAATTAGAAATTATGCTTTTTTGGACCCAAAAAACCTAAACAGATATCCCTGACCACTTCTAGAATTACTAGAATATATGGGAAGGCCCATTCAATATTTATTGTCAACacacaccccctttcaaaaccACCACTGCTACACTTACCATAGCCCAAAAGGCAGAGTTTTGCAATGTAGTGTGGTATATAGGATGCCATCGGTTTGTACACCAGCCTGAAGGCATTGAAGGCCTCATTCCCCATCCACATGAAGGAGCAGAGCAATGAGTAATGCAGTAGGACAGCCAAAAACCTGCACAGGTGTGGCTCCTTCAGAGAGGCCAGAATCCCattgaagaagaaggagaggcTGAGCAGAAGCAGGGCCACGGTGAGGTTACAATGCACAGGGGTGCACTCCGAGCTGGAATTTCTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78983 True 1975 lncRNA 0.43 3 18438202 18440919

Neighbor

gene id symbol gene type direction distance location
AMCG00020419 NA coding upstream 39471 18395857 ~ 18398731 (+)
AMCG00020420 NA coding upstream 48291 18382143 ~ 18389911 (+)
AMCG00020415 NA coding upstream 79357 18338437 ~ 18358845 (+)
AMCG00020413 LOC107596504,LOC108411466,LOC107753522 coding upstream 242572 18187199 ~ 18195630 (+)
AMCG00020412 LOC107707912 coding upstream 252154 18182076 ~ 18186048 (+)
AMCG00020425 ccdc102a,LOC106562045,LOC107594240,LOC107081377,LOC103376291 coding downstream 69544 18510463 ~ 18522856 (+)
AMCG00020426 ccdc102a,LOC106587147,LOC106562045,LOC107674431,LOC107754670 coding downstream 89259 18530178 ~ 18536093 (+)
AMCG00020427 LOC106562068,LOC107585958,LOC106903279,LOC106941941 coding downstream 168850 18609769 ~ 18617672 (+)
AMCG00020428 vac14 coding downstream 185049 18625968 ~ 18668640 (+)
AMCG00020430 NA coding downstream 230983 18671902 ~ 18680796 (+)
G63069 NA non-coding upstream 43896 18394101 ~ 18394306 (+)
G63068 NA non-coding upstream 44896 18393066 ~ 18393306 (+)
G63058 NA non-coding upstream 77709 18360275 ~ 18360493 (+)
G62994 NA non-coding upstream 227173 18210769 ~ 18211029 (+)
G62993 NA non-coding upstream 227825 18210138 ~ 18210377 (+)
G63203 LOC101154678 non-coding downstream 842039 19282958 ~ 19283173 (+)
G63208 NA non-coding downstream 885676 19326595 ~ 19329495 (+)
G63209 NA non-coding downstream 920953 19361872 ~ 19363484 (+)
G63248 NA non-coding downstream 1189355 19630274 ~ 19630567 (+)
G63259 NA non-coding downstream 1212305 19653224 ~ 19654272 (+)
G63045 NA other upstream 104170 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 366151 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 372413 18058558 ~ 18065789 (+)
G62895 NA other upstream 509298 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 966333 17459144 ~ 17471869 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 1156284 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 1190406 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 3694449 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 3915255 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 4612879 23053798 ~ 23062149 (+)

Expression


Co-expression Network