G63203 (LOC101154678)


Basic Information

Item Value
gene id G63203
gene name LOC101154678
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 19282958 ~ 19283173 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79125
CTCATGGTCcaagagtccttcaggtgccttttggcaaactccaggcgggctgtcatgtgccttttactgaggagtggcttccatctggccactctaccatacaggcctgattggtggagtgctgcagagatggttgttcttctggaaggttctcctctctccacagagacacgctggagctctgtcagagtgaccatcgggttcttggtcacctcc

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79125 True 216 lncRNA 0.55 1 19282958 19283173

Neighbor

gene id symbol gene type direction distance location
AMCG00020436 tshz3,LOC107696607 coding upstream 109573 19169312 ~ 19173385 (+)
AMCG00020431 NA coding upstream 419685 18783271 ~ 18863273 (+)
AMCG00020432 NA coding upstream 513533 18765518 ~ 18769425 (+)
AMCG00020429 LOC106562044,LOC106587150 coding upstream 554989 18707806 ~ 18727969 (+)
AMCG00020430 NA coding upstream 602162 18671902 ~ 18680796 (+)
AMCG00020442 LOC106562006,LOC107565776,LOC105924362,LOC107741896 coding downstream 543636 19826809 ~ 19832079 (+)
AMCG00020443 NA coding downstream 952423 20235596 ~ 20237641 (+)
AMCG00020445 NA coding downstream 972604 20255777 ~ 20260661 (+)
AMCG00020444 NA coding downstream 1016840 20300013 ~ 20310689 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding downstream 1184215 20467388 ~ 20489997 (+)
G63097 NA non-coding upstream 842039 18438202 ~ 18440919 (+)
G63069 NA non-coding upstream 888652 18394101 ~ 18394306 (+)
G63068 NA non-coding upstream 889652 18393066 ~ 18393306 (+)
G63058 NA non-coding upstream 922465 18360275 ~ 18360493 (+)
G62994 NA non-coding upstream 1071929 18210769 ~ 18211029 (+)
G63208 NA non-coding downstream 43422 19326595 ~ 19329495 (+)
G63209 NA non-coding downstream 78699 19361872 ~ 19363484 (+)
G63248 NA non-coding downstream 347101 19630274 ~ 19630567 (+)
G63259 NA non-coding downstream 370051 19653224 ~ 19654272 (+)
G63313 NA non-coding downstream 584612 19867785 ~ 19868282 (+)
G63045 NA other upstream 948926 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 1210907 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 1217169 18058558 ~ 18065789 (+)
G62895 NA other upstream 1354054 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 1811089 17459144 ~ 17471869 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 314030 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 348152 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 2852195 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 3073001 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 3770625 23053798 ~ 23062149 (+)

Expression


Co-expression Network