G63209


Basic Information

Item Value
gene id G63209
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 19361872 ~ 19363484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79131
TACCAGGCAAGTCTGGTCTCTTGATGCCACTGGTGCTGTTTGAGCTGTTTCCAAGGCCATTGAATGCCGCTAGGTTCTCCGTGCTGTAGGCCCTTAGGACAGACAGCATGTTCATCTGCTGCTCAAGATGGGCTTGTTCCGGTTTCATCACACCCGGGGGCACTCCTTGAGATGAAAGGAGATTCAAGCCCTGCCACTGTTTCTCCAGCAGTTGTGGCATAGTGGGTGCAAGTCCCTGCGAGTCCTTCGTTGCagtcccacaatgcatctggtCCCCGCTTCCATcatcgtcctcctcctcctcttcctcctcctcttcctcctcctcttcatcacTCTCACTGAGTGGTTTGTCAGTGGCAGACTCATTGCTGTGATCTGCAGCTCTGCCATCATCTTCCGACTGCTCTTGCTCCTCAAAAGTCTCCATCTCACTACACGAGACTCTGTCAGAAAGTTCATCGGTTGTGCACCTGTTAGTCAGGCTTGCAGACTTAAGATTCACTGTGTCAGTTGGCTGAATAGTTTGCTCAGTCTCATGATTAGCGCTGCTGGGACCTTGGGATCCTGATCCGCCTGAAGTTGCATAAATGCTAAACTGCTTGAAGAAATCATTCTGCATGTTACTCATATTGGTGTCCATGTGGTTTGGCCAGTTCAGACTCTTCTGTTCTCCTAAAGAATCCTTGCCTGGGTCCTGCTGGGTCATCTTCTCTACATGTGGTGTTTGTTTGGGCTCTTTGCTAGGGTGAATAGCACTGGCAACCAAACTGGCTTTGTTTGCCAATGGTACCTCCCCTAATTGTTCCTTGCTCATCCCTTTAATGTCCAAGATGCTCTCCTTACGTTTTGCTTTCCCCAGGTGGTTGGCCTGTAAGTGGAGGGCCATCAATTCCATGGATGAAGTTGTGAATGAGCAAAAAAGGCAGCCATGCCAGGCAACATTGTCTTGGATCGTAACAGACGAGCCTGGCAGAGAAGCAGAATCTGGCCTAACAGATAGATCGAGTGGTTCATACTGAGATTTCTCAGGTTTGCCTTCAGAAGGCTTGGCATCTGCTTTCTCCTCGCTGTTCTCGCCTCTCTTGGCTTTTGTTTCTATGCTTTCGCTAAAAGGCTTTTCTCTCatttccttgtcttttttcaGGGAACTCAGAACAAAACTGTCCATGAAAGCCTGTAGGGAACCTTGAAAGTTGACCCCGTTGCCCACCATGCTCTGGTAAGCTCTCCCCAGGTCAGAGAAGCTTGGCGTGCCATCTCCCGAAGCCTCCGAGCTCTTGAGATTTTCCAAGGAGTTTTCAGAGGCCATGCTAGTGCACTGTCCGTGGCGATCTCTTGAGGAGAGCATCCCTGATGCCCACTGATGGGGAAGCAGCTGCCCTCCTCTGAAGTCAACATTCGGCATTCCTTTAAAGACTCCTCTGAGGATGTCAGGTCTGATAAACATGCTGTTCTTGTTGCTGGAATGATCTTCCTTGTGTTCTTGGGAGTGGCCAGACATGGCTCCCCCACCGTTCTGACGTTCCCTGTGGTGACGCTCCAGATGATATTTCAGGGATGCCGACTGCGTACCTGCATAGTCACAGTGTGGGCATTTGTACGGCTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79131 True 1613 lncRNA 0.50 1 19361872 19363484

Neighbor

gene id symbol gene type direction distance location
AMCG00020436 tshz3,LOC107696607 coding upstream 188487 19169312 ~ 19173385 (+)
AMCG00020431 NA coding upstream 498599 18783271 ~ 18863273 (+)
AMCG00020432 NA coding upstream 592447 18765518 ~ 18769425 (+)
AMCG00020429 LOC106562044,LOC106587150 coding upstream 633903 18707806 ~ 18727969 (+)
AMCG00020430 NA coding upstream 681076 18671902 ~ 18680796 (+)
AMCG00020442 LOC106562006,LOC107565776,LOC105924362,LOC107741896 coding downstream 463325 19826809 ~ 19832079 (+)
AMCG00020443 NA coding downstream 872112 20235596 ~ 20237641 (+)
AMCG00020445 NA coding downstream 892293 20255777 ~ 20260661 (+)
AMCG00020444 NA coding downstream 936529 20300013 ~ 20310689 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding downstream 1103904 20467388 ~ 20489997 (+)
G63208 NA non-coding upstream 32377 19326595 ~ 19329495 (+)
G63203 LOC101154678 non-coding upstream 78699 19282958 ~ 19283173 (+)
G63097 NA non-coding upstream 920953 18438202 ~ 18440919 (+)
G63069 NA non-coding upstream 967566 18394101 ~ 18394306 (+)
G63068 NA non-coding upstream 968566 18393066 ~ 18393306 (+)
G63248 NA non-coding downstream 266790 19630274 ~ 19630567 (+)
G63259 NA non-coding downstream 289740 19653224 ~ 19654272 (+)
G63313 NA non-coding downstream 504301 19867785 ~ 19868282 (+)
G63318 NA non-coding downstream 833693 20197177 ~ 20197427 (+)
G63328 NA non-coding downstream 875346 20238830 ~ 20240926 (+)
G63045 NA other upstream 1027840 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 1289821 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 1296083 18058558 ~ 18065789 (+)
G62895 NA other upstream 1432968 17928328 ~ 17928904 (+)
AMCG00020371 nutf2 other upstream 1890003 17459144 ~ 17471869 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other downstream 233719 19597203 ~ 19602324 (+)
AMCG00020438 NA other downstream 267841 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 2771884 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 2992690 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 3690314 23053798 ~ 23062149 (+)

Expression


Co-expression Network