G63248


Basic Information

Item Value
gene id G63248
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 19630274 ~ 19630567 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79174
CAAACTTAATACACTTACATTTCCTCAAACCCTATGCTCATGACATATTATTGCCTACCTGTTGTCTAATTGGAACGGTTTAATAGTGTAACGTTTTGTAGGCGGCAATGAATCAATTCCACTCCACACTTTCTCAAACAGAGCGGGTTTTGTTTAGGAAAAACACTCAGGATCTGAGTGCTACACCGTTAACAATGTCCCAAGAATGGTGCAAATAGCTTTCCTTAGTTGCAGTTAAAAACTCATAGGCATGCTTGAACCACAACTATGGGGAAAGTACACTACACACTAAAG

Function

GO: NA

KEGG:

id description
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU79174 True 294 lncRNA 0.39 1 19630274 19630567

Neighbor

gene id symbol gene type direction distance location
AMCG00020436 tshz3,LOC107696607 coding upstream 456889 19169312 ~ 19173385 (+)
AMCG00020431 NA coding upstream 767001 18783271 ~ 18863273 (+)
AMCG00020432 NA coding upstream 860849 18765518 ~ 18769425 (+)
AMCG00020429 LOC106562044,LOC106587150 coding upstream 902305 18707806 ~ 18727969 (+)
AMCG00020430 NA coding upstream 949478 18671902 ~ 18680796 (+)
AMCG00020442 LOC106562006,LOC107565776,LOC105924362,LOC107741896 coding downstream 196242 19826809 ~ 19832079 (+)
AMCG00020443 NA coding downstream 605029 20235596 ~ 20237641 (+)
AMCG00020445 NA coding downstream 625210 20255777 ~ 20260661 (+)
AMCG00020444 NA coding downstream 669446 20300013 ~ 20310689 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding downstream 836821 20467388 ~ 20489997 (+)
G63209 NA non-coding upstream 266790 19361872 ~ 19363484 (+)
G63208 NA non-coding upstream 300779 19326595 ~ 19329495 (+)
G63203 LOC101154678 non-coding upstream 347101 19282958 ~ 19283173 (+)
G63097 NA non-coding upstream 1189355 18438202 ~ 18440919 (+)
G63069 NA non-coding upstream 1235968 18394101 ~ 18394306 (+)
G63259 NA non-coding downstream 22657 19653224 ~ 19654272 (+)
G63313 NA non-coding downstream 237218 19867785 ~ 19868282 (+)
G63318 NA non-coding downstream 566610 20197177 ~ 20197427 (+)
G63328 NA non-coding downstream 608263 20238830 ~ 20240926 (+)
G63334 vps35,LOC107659455,LOC107598694 non-coding downstream 618265 20248832 ~ 20251957 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 27950 19597203 ~ 19602324 (+)
G63045 NA other upstream 1296242 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 1558223 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 1564485 18058558 ~ 18065789 (+)
G62895 NA other upstream 1701370 17928328 ~ 17928904 (+)
AMCG00020438 NA other downstream 758 19631325 ~ 19636221 (+)
AMCG00020470 NA other downstream 2504801 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 2725607 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 3423231 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 3439844 23070411 ~ 23074945 (+)

Expression


Co-expression Network