G63328


Basic Information

Item Value
gene id G63328
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 20238830 ~ 20240926 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79257
GCCTTCTAAAATGTATGACATTGGGTCCTAAACACACTTTATCACACAAATGCAATTCTCAACTATcaataaaagctttatttttggGTGAGTCAGGCAGTAAAACAACATGCTTAGAGTGGAGGATATATTCTTTACACTGGAGGCTGCTGACATGCAGTTATGGTATGAGTGGACTACCAGCTCCAGTCCAAAGTAAAAATGAACAAGCAACAATAGAGTTGTTGGAATATGCTCTGCTTACCAGGCAGCAGAAACACTCATGGTTTGGTACCCACGGGACTGTGGATCTGTCAATACCATGGTTCTGCGGcttgtattcctgccttgcactcTGAAATTAAACGTGTTTTCCAGGACACAGGAGTGCAGTTGTCATCTCTCTTGGGCCAGTGTATTAGCTATATTGTGTAAGGAGTCTTCCCTTTGAGTTGATACTGCACTATATCaacttttatattaatttatttatacatacacagGTGTAACGCCCACACCACTGATTAGCTATTGAAGGTCTCTAAACAAGTTTCTACATGAAGATTTCTGGATGTAAATGTTGGTAAGAAAGATACTGTACAAATGCAAGAATAGAGTAAAAGGTTAAACAAACGGCTAACCCAGCCTTTACCTTTACAAACAAGATCTCTCCCGACAAAGTATTAAAGAGCAGGCTGTTACCAGTCAGATTCAATTGATTATCAACCATACATAGATCAGTAATGCTGTTCCTACAACAACAGGTAAAGTGCAAATTACTAAAAACTATATCAGTCTTACCCTCTATAATGTTGAATAGAATATGGTTATTATAAACCAATTTTAAACCAATCCTTGAATATGCCATTCACACATATGCCATTTTTCAACATATATACGAttctaaatgtatataaaacaattatgcaTCTAGGATATAGAACATGTAATTCACATAACTTAAACATTAGCCAGactgctgcaaaataaatgtaaattgttgAAACTAATGTATGGTTAATAGcaatttattgtttaattgtgcaAATGTGATGCAGAAAAAGGTCTAGCTGGTGTATTTACTCCAGTTACAAATGGACCACACAGCTCTTACAGCACAAATCTTCTGTTCTttaccagttttttttttttccttttatggtTTTTAAGTatccatacatacatgcacTAATGTATTTTAACTTGGACAATACAGTTAGCAAACAATGTCTGCCTTAAATGAAGAATGCAATGAGATTTAATAAAGAAGTTCTCCccagaacatttatattttgcagtCGTCACTGTTCGTCACAGTAAcactaaaatgtgtatttgctgCCACCTTGGaataacaatacagtacaaGAAGGACAGAAGCAATacagaacacaaataaaaggttATTAGATCAAAACATTACCCTTCTACTTATTGGGATGAGCTTGATGGGCAAACATGTAAATCCATTACTCATGCTAGATTATGCCAGAATATCTTGGAATTAGTTTGTCATTGGCAGGGTGGGGCAGGGGATTGCAACACGTTTTTCATCTGCAGCCTTTTACTGGTGTGTTCTTAAAATGAAGGAATGCGGATGTGAGAGAAGTGCTAGTAAGTACAGTGGAAACCTTTTATTCCTGGCACCTTGTAAAGGCACGCTCTAGGAGTCTAACACTAGAGTGGCATGGCTagttcaaaagaaaagaaaaaagaaaaaaataatagatggGGCAAGGAAGGGCAGGGTTACCACTGGATGGAATAGTTTAATTAGTGCAGTTTGCCATTTCTCTTCCCTCTACAGAACCAGGCCTTCATAGATTGGCCCGTCAGCCTCAGGCGACTCTCTCCGCAGGCGCAGATGCTCCAGTGtgttgtgaaagtgtttgtttatttgctccGTTTCCTCACTTGCCTCTAGGTTTGGAAGATCTTCTCTTATCTTCTGGATGAGCTGGTTTAGGACTTGAACGGTCAC

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79257 True 1960 lncRNA 0.38 2 20238830 20240926

Neighbor

gene id symbol gene type direction distance location
AMCG00020443 NA coding upstream 1189 20235596 ~ 20237641 (+)
AMCG00020442 LOC106562006,LOC107565776,LOC105924362,LOC107741896 coding upstream 406751 19826809 ~ 19832079 (+)
AMCG00020436 tshz3,LOC107696607 coding upstream 1065445 19169312 ~ 19173385 (+)
AMCG00020431 NA coding upstream 1375557 18783271 ~ 18863273 (+)
AMCG00020432 NA coding upstream 1469405 18765518 ~ 18769425 (+)
AMCG00020445 NA coding downstream 14851 20255777 ~ 20260661 (+)
AMCG00020444 NA coding downstream 59087 20300013 ~ 20310689 (+)
AMCG00020458 phkb,LOC107591034,LOC107723134,LOC107757780,LOC107598686 coding downstream 226462 20467388 ~ 20489997 (+)
AMCG00020459 phkb coding downstream 260565 20501491 ~ 20526222 (+)
AMCG00020460 NA coding downstream 393940 20634866 ~ 20658252 (+)
G63318 NA non-coding upstream 41403 20197177 ~ 20197427 (+)
G63313 NA non-coding upstream 370548 19867785 ~ 19868282 (+)
G63259 NA non-coding upstream 584558 19653224 ~ 19654272 (+)
G63248 NA non-coding upstream 608263 19630274 ~ 19630567 (+)
G63209 NA non-coding upstream 875346 19361872 ~ 19363484 (+)
G63334 vps35,LOC107659455,LOC107598694 non-coding downstream 7906 20248832 ~ 20251957 (+)
G63360 NA non-coding downstream 70773 20311699 ~ 20313272 (+)
G63433 NA non-coding downstream 322891 20563817 ~ 20580433 (+)
G63448 NA non-coding downstream 843191 21084117 ~ 21084538 (+)
G63477 NA non-coding downstream 1398070 21638996 ~ 21639656 (+)
AMCG00020438 NA other upstream 602609 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 636506 19597203 ~ 19602324 (+)
G63045 NA other upstream 1904798 18332569 ~ 18334032 (+)
AMCG00020407 NA other upstream 2166779 18067787 ~ 18072051 (+)
AMCG00020408 NA other upstream 2173041 18058558 ~ 18065789 (+)
AMCG00020470 NA other downstream 1894442 22135368 ~ 22142198 (+)
AMCG00020487 NA other downstream 2115248 22356174 ~ 22409493 (+)
AMCG00020505 NA other downstream 2812872 23053798 ~ 23062149 (+)
G63786 znf821,LOC107747380 other downstream 2829485 23070411 ~ 23074945 (+)
AMCG00020529 LOC107090538 other downstream 3792111 24033037 ~ 24068457 (+)

Expression


Co-expression Network