G63346


Basic Information

Item Value
gene id G63346
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 20255922 ~ 20256399 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79277
TTTATCTAGCGGTTGTTTCATCGACATTGCAGCCAGCTCCAAACACATAACTGTCTTGCTTATTGCTGTCGTATGGGAGGCCAGTCCGGTGCATTTGACCTGGGACAGCCGAAGATACTCCTCGGTTTTTTCAGTATTCTCGATGAAGTTATACCCAGTTTGGATGCTAACTTTTTAATCAAATCTTGCTCCATTACCAGTTTAAACGCCAAGATTAATGacagtatacaaaataaataaatacatctaacGATTGCGTTGTTGCATAAACCACCCCTGCAAAGCACACTACAAGACGTGCTGCACTTTCGCGCTAAATTTTATAAACACACCCCCCATAGTCACTCGGCCGTGTTCgtgtagtgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79277 True 367 lncRNA 0.43 2 20255922 20256399

Neighbor

gene id symbol gene type direction distance location
AMCG00020447 vps35 coding downstream 706 20238327 ~ 20255216 (-)
AMCG00020449 NA coding downstream 29645 20215104 ~ 20226277 (-)
AMCG00020453 NA coding downstream 548715 19706484 ~ 19707207 (-)
AMCG00020448 NA coding downstream 563247 19689373 ~ 19692675 (-)
AMCG00020450 LOC104957704 coding downstream 599156 19652823 ~ 19656766 (-)
AMCG00020454 mylk3,LOC107598691,LOC107659456,LOC107742117 coding upstream 6896 20263295 ~ 20276469 (-)
AMCG00020452 dnaja2,LOC100286703,LOC106524269 coding upstream 63280 20319679 ~ 20327023 (-)
AMCG00020451 NA coding upstream 76288 20332687 ~ 20354695 (-)
AMCG00020463 itfg1,LOC106587292,LOC107598687,LOC107660666,LOC107723136 coding upstream 106711 20363110 ~ 20366992 (-)
AMCG00020462 NA coding upstream 206805 20463204 ~ 20464258 (-)
G63257 NA non-coding downstream 619679 19634294 ~ 19636243 (-)
G63180 NA non-coding downstream 1178164 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 1818983 18436525 ~ 18436939 (-)
G63092 NA non-coding downstream 1857191 18397467 ~ 18398731 (-)
G63057 NA non-coding downstream 1897012 18357825 ~ 18358910 (-)
G63447 NA non-coding upstream 826863 21083262 ~ 21083461 (-)
G63628 NA non-coding upstream 2125965 22382364 ~ 22384918 (-)
G63629 NA non-coding upstream 2127118 22383517 ~ 22391215 (-)
G63634 NA non-coding upstream 2158936 22415335 ~ 22419743 (-)
G63680 NA non-coding upstream 2289369 22545768 ~ 22546057 (-)
G62961 NA other downstream 2215962 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 2240060 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 2629733 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 3438155 16794996 ~ 16817767 (-)
G62618 NA other downstream 3462755 16792866 ~ 16793167 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other upstream 32171 20288570 ~ 20299843 (-)
G63464 NA other upstream 1055803 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 1874443 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 2184393 22440792 ~ 22466767 (-)
G63679 NA other upstream 2287443 22543842 ~ 22544689 (-)

Expression


Co-expression Network