G63447


Basic Information

Item Value
gene id G63447
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 21083262 ~ 21083461 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79396
AGTATAGGATTGTCAATTTGATTGGAATACATTCTGCTTAGATAATGAactattagtttgttttctttgatttctcAGGGTTATGAATGGTGAAGTCCACTGTTGAATTCTGTTACTTAACTTTGAGATAAATGCTTAACGTCTTATTTTGTCTTGAAGGGGATAACGTCCTAGTCGACCTCAGTCCCATTCAAGAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79396 True 200 lncRNA 0.35 1 21083262 21083461

Neighbor

gene id symbol gene type direction distance location
AMCG00020464 NA coding downstream 523389 20541518 ~ 20559873 (-)
AMCG00020462 NA coding downstream 619004 20463204 ~ 20464258 (-)
AMCG00020463 itfg1,LOC106587292,LOC107598687,LOC107660666,LOC107723136 coding downstream 716270 20363110 ~ 20366992 (-)
AMCG00020451 NA coding downstream 728567 20332687 ~ 20354695 (-)
AMCG00020452 dnaja2,LOC100286703,LOC106524269 coding downstream 756239 20319679 ~ 20327023 (-)
AMCG00020465 cdh8,LOC106561990 coding upstream 25525 21108986 ~ 21132111 (-)
AMCG00020466 cdh11,LOC106587288,LOC106561988 coding upstream 557193 21640654 ~ 21659803 (-)
AMCG00020472 tk2,LOC106587284 coding upstream 1038208 22121669 ~ 22128173 (-)
AMCG00020478 LOC106561981 coding upstream 1062332 22145793 ~ 22164159 (-)
AMCG00020476 LOC107564548 coding upstream 1082318 22165779 ~ 22184597 (-)
G63346 NA non-coding downstream 826863 20255922 ~ 20256399 (-)
G63257 NA non-coding downstream 1447019 19634294 ~ 19636243 (-)
G63180 NA non-coding downstream 2005504 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 2646323 18436525 ~ 18436939 (-)
G63092 NA non-coding downstream 2684531 18397467 ~ 18398731 (-)
G63628 NA non-coding upstream 1298903 22382364 ~ 22384918 (-)
G63629 NA non-coding upstream 1300056 22383517 ~ 22391215 (-)
G63634 NA non-coding upstream 1331874 22415335 ~ 22419743 (-)
G63680 NA non-coding upstream 1462307 22545768 ~ 22546057 (-)
G63681 NA non-coding upstream 1465954 22549415 ~ 22549727 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other downstream 783419 20288570 ~ 20299843 (-)
G62961 NA other downstream 3043302 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 3067400 17987181 ~ 18015862 (-)
G62853 necab2 other downstream 3457073 17610664 ~ 17626189 (-)
AMCG00020346 nup93,LOC103368977 other downstream 4265495 16794996 ~ 16817767 (-)
G63464 NA other upstream 228741 21312202 ~ 21312605 (-)
AMCG00020471 NA other upstream 1047381 22130842 ~ 22132737 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 1357331 22440792 ~ 22466767 (-)
G63679 NA other upstream 1460381 22543842 ~ 22544689 (-)
G63819 NA other upstream 2071231 23154692 ~ 23161900 (-)

Expression


Co-expression Network