G63629


Basic Information

Item Value
gene id G63629
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22383517 ~ 22391215 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79616
ggattattaggaacacctgttaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaatgccttgttgatgctaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79616 True 328 lncRNA 0.44 2 22383517 22391215

Neighbor

gene id symbol gene type direction distance location
AMCG00020488 fam96b,LOC107673764,LOC107681502 coding downstream 28991 22352946 ~ 22354526 (-)
AMCG00020482 rrad coding downstream 58552 22321085 ~ 22324965 (-)
AMCG00020483 NA coding downstream 76042 22270714 ~ 22307475 (-)
AMCG00020477 nae1,LOC107562218,LOC102793500 coding downstream 159818 22216569 ~ 22223699 (-)
AMCG00020475 NA coding downstream 168576 22196435 ~ 22214941 (-)
AMCG00020492 LOC107685863,LOC107600353 coding upstream 83078 22474293 ~ 22512944 (-)
AMCG00020493 NA coding upstream 161633 22552848 ~ 22579832 (-)
AMCG00020494 NA coding upstream 192443 22583658 ~ 22588193 (-)
AMCG00020495 cbfa2t3,LOC107730156,LOC107728039,LOC107685856 coding upstream 210725 22601940 ~ 22616819 (-)
AMCG00020498 NA coding upstream 386522 22777737 ~ 22789084 (-)
G63447 NA non-coding downstream 1300056 21083262 ~ 21083461 (-)
G63346 NA non-coding downstream 2127118 20255922 ~ 20256399 (-)
G63257 NA non-coding downstream 2747274 19634294 ~ 19636243 (-)
G63180 NA non-coding downstream 3305759 19077477 ~ 19077758 (-)
G63096 NA non-coding downstream 3946578 18436525 ~ 18436939 (-)
G63634 NA non-coding upstream 24120 22415335 ~ 22419743 (-)
G63680 NA non-coding upstream 154553 22545768 ~ 22546057 (-)
G63681 NA non-coding upstream 158200 22549415 ~ 22549727 (-)
G63682 NA non-coding upstream 158732 22549947 ~ 22550167 (-)
G63683 NA non-coding upstream 160305 22551520 ~ 22551798 (-)
AMCG00020471 NA other downstream 250780 22130842 ~ 22132737 (-)
G63464 NA other downstream 1070912 21312202 ~ 21312605 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other downstream 2083674 20288570 ~ 20299843 (-)
G62961 NA other downstream 4343557 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 4367655 17987181 ~ 18015862 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 49577 22440792 ~ 22466767 (-)
G63679 NA other upstream 152627 22543842 ~ 22544689 (-)
G63819 NA other upstream 763477 23154692 ~ 23161900 (-)
AMCG00020561 NA other upstream 2256788 24648003 ~ 24677810 (-)
AMCG00020559 NA other upstream 2300678 24691893 ~ 24698947 (-)

Expression


Co-expression Network