G63634


Basic Information

Item Value
gene id G63634
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 22415335 ~ 22419743 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79624
CAAATTTATAGAACAGTAAGAATGCAAGACTGAGGACATACCTCTCTGTCGAGTCCAGGTGAAGCCACACTAATCGCACCAGTCTGAGAGTTGATCATAAACATGTTGTCGTTGGGCAATTTAGGATCCTGGCTGACAATGCTATACACGACCTCACCATTGTACGTCTCTGGATCATCTTTATCAATTGCCAGTACTTTCATAAACTGAGCaccttaaaacaaaactggttaTCAGTTACAGTTTAAGTCTAACCGATATCAAATTTTAGGAAAGCGATACACAAACGAATTACACACAAAATGGAAGACCATCATGGACCACGCTTTGAGAAGCACTGCTCTAAATGAAGCAAGATTATACACAATCCTTTAATAAACAGACTGTCATTTATTAACATAGCAATGCACCAGATACAATACAATTCAgtaaatacttgttttattaAGCGGTTACAAAGTGCTTGACAAATACTGGTCAGGTAGAAAATGCGGTTACTTAAGTCAACACCTTTATCACTAACCATCTGTCACTAAATTCCTTCTGTGTGGTATATAGAATACAATATTTGCGGTCACTGAAAACCAATCCTACCTGGTTGTGATCCTTCAGTAGCATTGCCCAAGAAGGTGTCCTTTATAAATTCAGGTTTGTTATCATTCTGATCAGATACAGTAATAATGAGTTCCATTGGATCCTCAGCTTTTCCTCCACCCACTGCAATAGCATGAGCCATGAGCTACAGAAAagatatacagatgggtgaacaattaaaggaaaaaccaacaaagtgtctccgtaaggtgttgggcaccacaagccgccagaacagtgtcaatgctcttggcacagattctatgagtctctggactctactggagggatgaacaccattcttccaaagatattccctcatttggtgtttagaaggtggtggtggagagcgctgtctaacacgtcggtccaaaatctcccataggtgttcaattgggttgagatctggtgactgcgaaggcgaTAGCATATGATTCATATCATTTCCAtactcaaaccattcagtgacccctcgtgccctgagGATGGGAGTAGTCTCTTCTAGGATGAAAATGCCCCCATCAGGACAGAAGTGTTTCACcttaggataaaggtgatcactcaatAACTTTAGGCACTGGTCTGCAAAGTTGTGCCTGCGAGAGGTGTCTGCTGTGCCCGCGATGGTTATTcaaaaattttaaataaactaagtTTGAgggaaaaagcacaaaaagattttaattctcaaaaacaattccaataatgcactgcaaaaattttaaaaattgttgTCTGGCACTCACTCACAAACGTGCAGTGTAGTGAGAGATCGAGCAGAGTTTCAGAATGACAGGTCTGAGAAACAGGGGCTCAAGTCCAGCAAAATAACGGTCTTTTGGTTGCagttactaaaataaaaatacatctgaagGCGTCTGCAACTTCAAAAGATCCTCTGCATGTTCACAAGTACAGATCTACGCAGGGACGCTTCCCTTTCTTTTGCCGAAGTGCCTAATTAGTCCCGACCACACCTCCTGCACCACACCTCATCAGCCTCCACGGACCACCCTTAACaacatcccccccccaccccagaccGCCAGATTCATGCCCGTGGAAAAAATATTGCGGAACActgctctaaggggacaagtggagccaaaccatgccaggaaaatgcccccccaaAGCATAGCACAGCCTCTgaaccccctcactgtaggggtcaagcagtcaggtcTGTACCGTTCTATTGGTGTCGCatacacatgcactcgcccacttgtcaagaatatagtgaaggatgactcatctgaccatatcacttttctCCACATCACTGTAGATCAGtacctatggtttttgcaccactgaactctcaaatgtgcatttgtctttgtaatgaggggtttatgcactgcagccctactataatatcccacCGTGTAGTTCTCgacagactgttcttgctgacagtctgatcacatcctgcattgacattctcagtcacctgggaaagagtcgctcttctgtttttccttgcaTATCGCAGTAATAACTATGTTCCTCCAGTcgtttattcaggtttttaaaTTTGTCACCCGGCTGTAGGTTAAAATATGATGCTGGGTTCCAAACTTAACTTAATGAACCTGAACCAAAATATGTCTTCACATAGGCTTTCTAATGttgttataaatattaattgaaatccAAAACAGAATTCGACCAGGCACATTGGAGTTAGAggttcaaatcaaaagacaacaTGTAACGTTCTGCAGTTGCACACTGGATTGCAAAagctttgcatttcatttattttcagtggaatCTCAGTTAAGCAGCTAAAATGTACTTGTCCATCACAAATAGTTTcccaataaattaatacttagTAATAGCTGCCCCAATTTTTGTGGATCAGAAAAAAAGTCACAATATCACAGACTACATTCCAAACTGAGAGACTCCACTTCTCTAAGGACATTTGACcacttcaacatttttttttttttaattttgctcgTGTACAACTCAAATTTTGCTATGCTTGTAGTATGTCAGAGCATTctctcaaattacatttttattaggtAAGTGCATCAGAAGATAAGCTGTAGCCTCCTTTTCACAAATTTCATTAAGAAATTCTCTAGGTCTGGGATGCCCCATGATATGATTTCaacaggtttttttatttttatttagtagtaGTCATAACATTCACAATTAAGTGgacatgaaatacatttctataatttAGAATATCATTGCATCACCAGAGAttgaaaatacaatcacaaCTACTAATGGGCAGTTTATTTTGTGTCCAAGGCCCTGAGATTTAACAGTTTCATTTCATTATACATGGTCTGTAGGTGGAACTGAATGTTCATAACCTGCACGGGCATGATGCAAGTCATTTGATTTAATggcaagaataaaaacattttctgaggcATCTTATTCATATGTACCTGGGACCTGAGACAATTATGTAGTACTCATCTGCACCTGGGTTGTAATAACAGGGGTCATAATCCTCATATGCCAAGTACCCCAAGTATCATTTAAGCTCTTATACAATAGTTTACACATAGGAGAAAACAAATTGGATGAACAAAGGACTGAAGAATTATACTTACAACATATTGATCCTGAGCCTCTCTGTCCAAAGGCTGGGTCACATATACAATTCCACTGTTCCTGTCGATTGTGAAAACTCCTTCAGGTGGCTCACTTGCTCCTGGTCCAGTAATGCTGTATAGAATTTGTACTTCCTTGGCATTACTAGATTTGATCTGGAATTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79624 True 3356 lncRNA 0.40 2 22415335 22419743

Neighbor

gene id symbol gene type direction distance location
AMCG00020488 fam96b,LOC107673764,LOC107681502 coding downstream 60809 22352946 ~ 22354526 (-)
AMCG00020482 rrad coding downstream 90370 22321085 ~ 22324965 (-)
AMCG00020483 NA coding downstream 107860 22270714 ~ 22307475 (-)
AMCG00020477 nae1,LOC107562218,LOC102793500 coding downstream 191636 22216569 ~ 22223699 (-)
AMCG00020475 NA coding downstream 200394 22196435 ~ 22214941 (-)
AMCG00020492 LOC107685863,LOC107600353 coding upstream 54550 22474293 ~ 22512944 (-)
AMCG00020493 NA coding upstream 133105 22552848 ~ 22579832 (-)
AMCG00020494 NA coding upstream 163915 22583658 ~ 22588193 (-)
AMCG00020495 cbfa2t3,LOC107730156,LOC107728039,LOC107685856 coding upstream 182197 22601940 ~ 22616819 (-)
AMCG00020498 NA coding upstream 357994 22777737 ~ 22789084 (-)
G63629 NA non-coding downstream 24120 22383517 ~ 22391215 (-)
G63628 NA non-coding downstream 30417 22382364 ~ 22384918 (-)
G63447 NA non-coding downstream 1331874 21083262 ~ 21083461 (-)
G63346 NA non-coding downstream 2158936 20255922 ~ 20256399 (-)
G63257 NA non-coding downstream 2779092 19634294 ~ 19636243 (-)
G63680 NA non-coding upstream 126025 22545768 ~ 22546057 (-)
G63681 NA non-coding upstream 129672 22549415 ~ 22549727 (-)
G63682 NA non-coding upstream 130204 22549947 ~ 22550167 (-)
G63683 NA non-coding upstream 131777 22551520 ~ 22551798 (-)
G63684 NA non-coding upstream 132257 22552000 ~ 22552303 (-)
AMCG00020471 NA other downstream 282598 22130842 ~ 22132737 (-)
G63464 NA other downstream 1102730 21312202 ~ 21312605 (-)
AMCG00020446 cssa11h16orf87,cunh16orf87,clg02h16orf87,zgc:92818,LOC106587296,LOC103043940,LOC107757775 other downstream 2115492 20288570 ~ 20299843 (-)
G62961 NA other downstream 4375375 18006168 ~ 18039960 (-)
AMCG00020403 NA other downstream 4399473 17987181 ~ 18015862 (-)
AMCG00020489 rnf166,LOC106587267,LOC106562062,LOC107685853 other upstream 21049 22440792 ~ 22466767 (-)
G63679 NA other upstream 124099 22543842 ~ 22544689 (-)
G63819 NA other upstream 734949 23154692 ~ 23161900 (-)
AMCG00020561 NA other upstream 2228260 24648003 ~ 24677810 (-)
AMCG00020559 NA other upstream 2272150 24691893 ~ 24698947 (-)

Expression


Co-expression Network