G63786 (znf821,LOC107747380)


Basic Information

Item Value
gene id G63786
gene name znf821,LOC107747380
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 23070411 ~ 23074945 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU79808
TTTATTTCGACATTCTATACCTGCTTTCAGTATCATTTGTACATATCTGTTAATCCAGCAACAGAGAATGGATCCCAAACTGACCATTCACAACACATGACACACAACATGACTATCATAAATACAGAGTGTTCCTTTTCAAGTTTCCCccccttttaattatttttggcCTTTTAGTTTCTTTTGTAAACATGAACAACCAGAGTGTATCCTGAAAAACTAACCAAAGGccaatagttttaattttactcTAGAATCAGTTTTCCTtgacaaataagaaaacaaaaatgggcAGGCATATTATTACTTATAGCTCAACACTATCTCATATTTAACAattctaaaacaaatgcagtttaCAACATGCAGTGTTAACCTAAACCAGTCTTGTGTAGCCAGGCCAAGCTTTTTacaaagcccccccccccccccccccccccccccatctgcAAAGGGCTTATAATAACTGGGTAGAATCagtatttcatataaatatggaaaataatttcacatggtaatttaactttttatacttttattccATGGTTTTTGAAGGATACCACGTTTACTTTAAATTCAGCACCCTAATCAAAGAAAATCTATTACCAAATGCAAAAACTGTTTATACCCGTCATTCATTCCACGATGATGTCAGTATCTCTAGACACTGCCACTCTATAATATACTTACTGCAAGTACAATAATGCATAAAACTGCTTGAATAAATTATACAAGACAAATATTCTGTAAGTGAATAACTATCAGTCTTAGGCCATagtatgttaaatatttatcacCAATTGTTTGCTCAGTCTTTGCTTCTGAATGGAAGTGCATAAACTACAGCCAATTATTGTTCTAAAATCTTTCAATATCGGGtgcatgctttgtttttcagtatgGTAATAGAGGCCttgtttacagaaaatgaacCACTTCTCAAATCCAGCCCCCTATAACAAATCCTTGATTAGGGTGCTGAATCAACAGTACAAAGCTATTCTGAGATGCACTGCCTGAGTTGCATGAATTAAGTTTTCTGTCCATTTCACCTTACAATCTGCATAGTTATAGAAAATGTCAATTTTCCATCAGTAGGAATTAACTCCTATTGCATAGCAGTTTGAACTGCTCCAGGTGccaggttaaaaataaaaacaaaaacaaaaacaaacacgcaaaactataaaaataaaataaaagtaatcttGATACAAGTGTCTAACCTGACTTATTACTTGGAATGGCTCAAACAGAATACCAGTCTTGTTTCCCATCTTGATTAGAGTTCCAGTATAAAAAGATTCCActatacatgtgttttatagTCTAAATTCATTTCAATTgggttacattaaaatgtaaaaaagaccCTTTATAATGGATCTTGTGACAAATTTCCTCATCTAAAATATTTGTAGACGGCCTCATCCCTCCAACATAATTTAATAGTGAGAAATGTCTTGTTAATGCATGACTGAGTGTTTCTAATGAATTATGCTGTATTACAATCAAGTGTTACTAATATTTGAAATCAGCATTGGAAAAAGCTAATGTAGCAAAATCTCAACCACAGAACTTTCCAACAAGAAAGGCAAAGCCatcatgcatttataaattacTGGGCTGGGAAAAACCACTTGAATAAATATtatgttcaaaatattatattaattctaGGCTGACCACTAGCAAAGACTATTAGCATTTTCAGTTCATGTGACAGGCCCTGCTGTCTCCGAGTACAAGAAAGAGACATACGCATATTATACAGTAATAGCAGAACAAGATATTGAGTTTAGTTGAGGCTCTTCCATACaattatgccccgtttccactggtcATGTTTAAGTGCACATTGGCCTGTCCGTTTGAGTCCAGGCATCTCTACGGTTGCTGAGGTGCACCTCCACCTGCAcccaaactagtttcaggagaTACAGTTTCATATATCACACCTGCcgagtcccaaactggtctaGGAGACCGTTATATCCAATAATAACTACAATAATGGCCGCTGTAAGAGAGACGGTAGAAACTTTTCCCAAGAAAgaatgtgtgtttaccttgtgAAGATGATGAAATTAGAGCACTTATTAATGTATGGTTGGAAAGTGCCATACAGGATGAATTGCTTGGAACaggaatacatttacattttttaaaagatcctgctggagaaagcaCTGCACCGGACTACAATAGTGCagtgacaaaatgaaaaaactaaaaatacagtacaaaaaggTTAAAGATGCTAACAACAAAAGTGGTAACTTTTGTTTCAATGCTGTTTGACCTTTGGTgtctcacattcacttcctgGGGCAGCTGTAcctaacaaaaatataatgcaatcGCAGGCAGCAGTTTTCAGGTGTATGGGTACGGCACAGACAGAACAAGGTGCACCAAAGCACGGACAGTGGAAACATCACAGTTGCTGAATTCTGCTAACCCTGTGGACCACTTGATGGGCCTAAATTAAAAACCAATTTGCTAAATCAACATTACAGCACGTGACACTTTAGTTTTTAAAGTTTGTAAGTTACAAAGGGAGGATGTCTGACAGGTAAAGAAGGAAATGGTgtgtaaaagaaaatcaaaccatAGGCTTTTCTCTTTATACACTGAGGCAGACACCTCCATGGTGGCTACCCTAAACCTAGCAGGTTTAATTCCCTGTGtgtgatttagtttttgttcaTATGCAGAAGTAAGGAAGAAGTAAAATATGGCATAAAGTAACAGACATtaaagaggagagggaggtcaCTATGCATTGTAAAAGTGAACAAAATATCTTGAGTCCCAAAGTTATAAATACAGTGAATAATATGGAATTAAAAGGCCTAATGTTCCAAGTGGTCCACAGAGTAGGAAGAATTTAGTTACTGCCAAATCTACCCAGAAAAATACCTGTAGTGTGCAGGAAACAGGTTTGAAAGTGTGACTGTAAATGTGCTATTAACTGGACACATTCAAAACCTATtccgcttttttttttttttacagtactgttttttactatatatatttgtgtgtgtttatatacacgtgtgtatgtacacacacatacacatttaaaaaaatcagacattataaaataaaggaaataaagtaTCTCTTCTACATTAGATTCTAGGTTGAGTCCTGGTATTAGGGTGTGTTGGTTAGGTGAGGTGTGGGAGATTGGGGAATGGGGGATGGGTcaggagagacagaaaaagtTCTTTGTCAATTCAGAGAGCATGTGTATGCCAGTACCACgatcattctctctctctctctaccggCACACTAATCCTTTATCAGTACAACTATTTGAGTCCAAAATTAGGCCACTAGACAGTGCGAGTACTGCCAGGTCCCATCGCGAGGTAGTAGATTCAGTGGATATGAACTAGCCATTGACCCACATTGGCAGCGTCAGGAGTAGCTGCCAGTAAACTCCAGCCACAGGCCGGCAAATTCTATCAGCAGGGAGGTGACGAGTGAGCCACTTTAACCCATTATCATCACCACTTGTTGATGAACAAACATTTCTTGGACTGTAAGTGTCTATTGTTCAATACTAGTTAAATTAGGTTTTCAATCAATCACTcaggaaaaaaagaaggaaCAATACAAAGTCTGTCGAACATGCTGTTTCACATCAGGCATTGGGCTTCTACAACATTCTTCAGTCTCTTGATGCTAAATTCTCCAGACACTCACCCACGGTGACCATTTCttctctctttaaaaataaaagtgttctCAGCTAGCTGAGTCAATTTTCAAACTTTACAACCGTTTGGATACGTTCACTGTTACGATCATGTACTCTACGTTACTCAAATGATGGAGGCTGAGTGGACTGGTgggtgggagagagggacaaCAGCAAAGAAGGTACAGTCAAGCCCAGTGGAGATTCGTTTTGCTATGTGAACCCTGACAAGAGAAGCAGAAACTGAACCGGGGGTGACTGGTCTGGCAAAGCGTCTCATGTTGAAGACGCGTGCGTGCTTGAGAGCAGCAGCCTTGGCAGCAGGGAAGAGGGGGAATGGGGCTCGCTAGGGCAGCTTCATGAAGAGGCCGTTGTCCAGGGAGGGGCAGGGCATGGGGAACTGGAACAAGCTCATGTCAGCCGTGAGTGCTGCCATGGCAGCAGGGTCATGCTCGATCTGGTTCCTTAGGCTGGGGTCGATTTTCTCCAGCCTGCGCTTGAGCCGCTTGGCCTCCCTCTCGCGGATGAGCCTGGCCTGCCTCTTCTCGGGTGTCTCGTTGGCCCTCTTCAGACGCATGGCCTCCCGGTCCCGCTGCAGACGCCGTGCCCTCTGCTCCTCTGTCTCCTGCATCCTCTGCAGCCTCTTGGCCTCACGGTCCCGTAGCCTCCTCAGCTCGCGCTCCTCGGGTGTCTCACAGGCCCGCTTGGTCTTCTTGGCCGTGCGCTCACGCTCCAGTCGCTGCATCCGGGCCTCCAGAGGCTCATTCTGCCGGCGGATGGCCCACTTCCTCATGGAGGGTGACTGCGCCTCCACCAGCTG

Function

symbol description
znf821 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.

NR:

description
zinc finger protein 821 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79808 True 4535 TUCP 0.41 1 23070411 23074945

Neighbor

gene id symbol gene type direction distance location
AMCG00020508 NA coding upstream 17724 23045179 ~ 23052687 (+)
AMCG00020506 NA coding upstream 68565 22994296 ~ 23001846 (+)
AMCG00020507 NA coding upstream 108680 22953442 ~ 22961731 (+)
AMCG00020500 ist1 coding upstream 153578 22909385 ~ 22916833 (+)
AMCG00020499 spg7 coding upstream 161682 22901112 ~ 22908729 (+)
AMCG00020514 ap1g1 coding downstream 16309 23091254 ~ 23113539 (+)
AMCG00020512 phlpp2,LOC106587330,LOC106587351 coding downstream 45179 23120124 ~ 23161895 (+)
AMCG00020513 usp10 coding downstream 96855 23171800 ~ 23205292 (+)
AMCG00020515 NA coding downstream 139444 23214389 ~ 23232308 (+)
AMCG00020518 zfhx3 coding downstream 500161 23575106 ~ 23582740 (+)
G63784 NA non-coding upstream 262 23068311 ~ 23070149 (+)
G63772 NA non-coding upstream 96320 22973878 ~ 22974091 (+)
G63592 NA non-coding upstream 679170 22383517 ~ 22391241 (+)
G63564 NA non-coding upstream 687920 22352173 ~ 22382491 (+)
G63589 fam96b,LOC106562058 non-coding upstream 715432 22354018 ~ 22354979 (+)
G63787 NA non-coding downstream 1956 23076901 ~ 23077313 (+)
G63789 NA non-coding downstream 11433 23086378 ~ 23086933 (+)
G63890 NA non-coding downstream 775405 23850350 ~ 23897755 (+)
G63898 LOC108433019,LOC103398424 non-coding downstream 823562 23898507 ~ 23899754 (+)
G63947 NA non-coding downstream 995771 24070716 ~ 24072160 (+)
AMCG00020505 NA other upstream 8262 23053798 ~ 23062149 (+)
AMCG00020487 NA other upstream 660918 22356174 ~ 22409493 (+)
AMCG00020470 NA other upstream 928213 22135368 ~ 22142198 (+)
AMCG00020438 NA other upstream 3434190 19631325 ~ 19636221 (+)
AMCG00020439 LOC107696663,LOC107556242,LOC107746488,LOC107726063 other upstream 3468087 19597203 ~ 19602324 (+)
AMCG00020529 LOC107090538 other downstream 958092 24033037 ~ 24068457 (+)
G63939 NA other downstream 977044 24051989 ~ 24055592 (+)
G64046 NA other downstream 1403890 24478835 ~ 24482114 (+)
AMCG00020572 NA other downstream 1987428 25062373 ~ 25076690 (+)
AMCG00020573 NA other downstream 2003197 25078142 ~ 25084873 (+)

Expression


Co-expression Network